Transcript Information: S_Transcript_446381.p1


Annotated TAIR IDAT5G45290.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18350011-18352092 | Reverse length=546
E-Value1.3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6474141480404
Replicate 26.5934773390274
Replicate 34.6636803889565
Condition 2: 8 Hour
Replicate 19.8047771573025
Replicate 28.4858736219653
Replicate 310.045399446026
Condition 3: 24 Hour
Replicate 113.05671197139
Replicate 26.7730931147705
Replicate 38.1174395786581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_446381.p1 GENE.S_Transcript_446381~~S_Transcript_446381.p1 ORF type:5prime_partial len:87 (-),score=18.33,zf-RING_2|PF13639.2|1.8e-14,zf-RING_11|PF17123.1|8e-10,zf-rbx1|PF12678.3|1.4e-08,zf-C3HC4|PF00097.21|2.9e-07,zf-C3HC4_2|PF13923.2|4.9e-06 S_Transcript_446381:202-462(-)
GAAAAACTTAATACAGCTAATCATGGAGATGAAAAGCGTAATGCAGCTGATTCTAATGACGATGTGGACCAGTGCTATATATGTCTGTTGGAGTATGAGGAAGGTGATAAAATACGAGTTCTTCCTTGTCACCATGAGTATCACATGTCTTGCGTTGATAAATGGCTGAAAGAGGTTCATGGCATATGTCCACTTTGTCGTGGAGATGTTCGAGGGGTCAGAGAGGGCACTGCATCCAGCTCAAATGCAGATCTCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_446381.p1 GENE.S_Transcript_446381~~S_Transcript_446381.p1 ORF type:5prime_partial len:87 (-),score=18.33,zf-RING_2|PF13639.2|1.8e-14,zf-RING_11|PF17123.1|8e-10,zf-rbx1|PF12678.3|1.4e-08,zf-C3HC4|PF00097.21|2.9e-07,zf-C3HC4_2|PF13923.2|4.9e-06 S_Transcript_446381:202-462(-)
EKLNTANHGDEKRNAADSNDDVDQCYICLLEYEEGDKIRVLPCHHEYHMSCVDKWLKEVHGICPLCRGDVRGVREGTASSSNADLT*

Click here to download the sequence:
Link to NCBI Protein BLAST