Transcript Information: S_Transcript_447017.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18353793955297
Replicate 20
Replicate 30.5087651333407
Condition 2: 8 Hour
Replicate 10
Replicate 20.30857722261692
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.46890644640719
Replicate 31.0436708029703


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_447017.p1 GENE.S_Transcript_447017~~S_Transcript_447017.p1 ORF type:5prime_partial len:145 (-),score=17.78,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|4.9e-19 S_Transcript_447017:38-472(-)
CAGGAGTATTATCTAAAACAGAATGCAGTTTGGGATGTTACAGCTAGGCAGGGAGACTCTTGGGCCTGGAAAAAAATGCTAAATGTAAGAGATGAAATTTGCAGCCTGATTGGAGAGAGCAGAGTAAAAGAGACGCTGCAAGACTGGGTAATGTCTGGGAAACTAACAACAAAGGCCTATCACTTGTTCAAAGGGGAAGGGACAAAGAAGATATGGGCAAAAACGTTTTGGGATGGAGCTGTAATGCCAAAACACTCAATTATTGCTGTGATGGCAATCCATAATGGACTCCCAACACAAGATAATCTCACTAGAAGAGGTTTGCAGCTAGCCAACAGGTGTGTTCTCTGCTGCTGTGCACAAGAGTCTGTTCCACATATCTTCTTTGAATGCTGTTTAACTAAGACAGTATGGAGAAATGTCCTGGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_447017.p1 GENE.S_Transcript_447017~~S_Transcript_447017.p1 ORF type:5prime_partial len:145 (-),score=17.78,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|4.9e-19 S_Transcript_447017:38-472(-)
QEYYLKQNAVWDVTARQGDSWAWKKMLNVRDEICSLIGESRVKETLQDWVMSGKLTTKAYHLFKGEGTKKIWAKTFWDGAVMPKHSIIAVMAIHNGLPTQDNLTRRGLQLANRCVLCCCAQESVPHIFFECCLTKTVWRNVLDS*

Click here to download the sequence:
Link to NCBI Protein BLAST