Transcript Information: S_Transcript_447092.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value4E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.69671967023731
Replicate 30.7765362561516
Condition 2: 8 Hour
Replicate 10.89791117124771
Replicate 20.70647943072821
Replicate 30.44875468642066
Condition 3: 24 Hour
Replicate 10
Replicate 20.47713287529152
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_447092.p1 GENE.S_Transcript_447092~~S_Transcript_447092.p1 ORF type:internal len:95 (-),score=5.33 S_Transcript_447092:3-284(-)
GACTGCTTAGACTTGATACTTGACTTTGTCAAAGGACAGAAAAGATTGAGTATAGTTGGAGGGAACATGAGCAGCCTTTTCGCTTCATTGCTGAATATCATTGTACACCTGCGAGGTCCAACATTATTCTGCCGGAAACCAAACAGAGTGATTGTCAATAAGAACCCTGACTCCGGATCAGTAGTTGTCATGTGTATTGAGGTATTAACCAGAGTTGCCGCCAAGCATGCTATGTTTTGCCTGGACTCCTTTCACGTAGGGCATTCATTGTGCATACCAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_447092.p1 GENE.S_Transcript_447092~~S_Transcript_447092.p1 ORF type:internal len:95 (-),score=5.33 S_Transcript_447092:3-284(-)
DCLDLILDFVKGQKRLSIVGGNMSSLFASLLNIIVHLRGPTLFCRKPNRVIVNKNPDSGSVVVMCIEVLTRVAAKHAMFCLDSFHVGHSLCIPA

Click here to download the sequence:
Link to NCBI Protein BLAST