Transcript Information: S_Transcript_447342.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68531333652825
Replicate 20.75752067150265
Replicate 30.31661349499744
Condition 2: 8 Hour
Replicate 10.27457584099313
Replicate 20.76813214213654
Replicate 30.54890594690939
Condition 3: 24 Hour
Replicate 10.75003891813199
Replicate 20.77815662064712
Replicate 30.97424205856672


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_447342.p1 GENE.S_Transcript_447342~~S_Transcript_447342.p1 ORF type:internal len:233 (+),score=49.48,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|7e-16,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|4.3e-18,PPR_2|PF13041.2|3.3e-23,PPR_2|PF13041.2|4.4e-20,PPR_2|PF13041.2|1.8e-06,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|5.8e-10,PPR_1|PF12854.3|4.6e-17,PPR_1|PF12854.3|2.8e-13,PPR_1|PF12854.3|3.3e-13,PPR_1|PF12854.3|4.7e+02,PPR|PF01535.16|2.6,PPR|PF01535.16|2e-07,PPR|PF01535.16|6.9e-10,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|7.6e-11,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|7.7e-07,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.00068,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|6.8e-07,PPR_3|PF13812.2|0.016,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|31,MRP-S27|PF10037.5|0.052,MRP-S27|PF10037.5|0.47,TPR_19|PF14559.2|0.096,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|10 S_Transcript_447342:1-696(+)
GCCTTGAACCTCTTTTCTGAAATGAAAAGCAAGGGCATCTCCCCTGATGTTGCCACCTACAATTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCTGTTGGGATGAGGCTAAGGAAGCATTGACCGAGATGTTGGAAAGCAATGTAGCGCCAGATCTCCACACATACAACACCCTCATTGATATGTGTTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGACTTGATGATTAAGAGGGGTGAGAGGCCTAACATTGTTACTTACTCTTCCCTACTGGATGGATATTGTTTGCGCGGTCAAATGGATGAAGCATCACAGTTAATGTATTTGATGGAAAAAGATGGGTGCCAACCTAATGTTGTCACCTTCACCACCATCATCAATGGGTATTGCAAGAGTAAGAACCTTGATGAAGCTTTCAGGCTATTCAAGGAAATGTTTTCTAAAGGATTGAGCCCCAATGTGAATACTTATAATACTCTTATAGACGGCTTGTGCAAGGGTACTAGGCTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAAATGCTGTCACCTTTAGTACTTTGGTGGATGGCCTATGTAAGGATGGACAACTTGATGAGGCAGTAGCAATGTCTAAGGAGATGGAGAGGTATGGAGTGGTAAAGAATCTTGTGAGCTATAACGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_447342.p1 GENE.S_Transcript_447342~~S_Transcript_447342.p1 ORF type:internal len:233 (+),score=49.48,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|7e-16,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|4.3e-18,PPR_2|PF13041.2|3.3e-23,PPR_2|PF13041.2|4.4e-20,PPR_2|PF13041.2|1.8e-06,PPR_1|PF12854.3|6e+02,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|5.8e-10,PPR_1|PF12854.3|4.6e-17,PPR_1|PF12854.3|2.8e-13,PPR_1|PF12854.3|3.3e-13,PPR_1|PF12854.3|4.7e+02,PPR|PF01535.16|2.6,PPR|PF01535.16|2e-07,PPR|PF01535.16|6.9e-10,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|7.6e-11,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|7.7e-07,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.00068,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|6.8e-07,PPR_3|PF13812.2|0.016,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|31,MRP-S27|PF10037.5|0.052,MRP-S27|PF10037.5|0.47,TPR_19|PF14559.2|0.096,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|10 S_Transcript_447342:1-696(+)
ALNLFSEMKSKGISPDVATYNSLLRGLCSLGCWDEAKEALTEMLESNVAPDLHTYNTLIDMCCKEGEVEEAKSILDLMIKRGERPNIVTYSSLLDGYCLRGQMDEASQLMYLMEKDGCQPNVVTFTTIINGYCKSKNLDEAFRLFKEMFSKGLSPNVNTYNTLIDGLCKGTRLQLALQLFKEMQAQGITPNAVTFSTLVDGLCKDGQLDEAVAMSKEMERYGVVKNLVSYNV

Click here to download the sequence:
Link to NCBI Protein BLAST