Transcript Information: S_Transcript_447343.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45106781754543
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.54217094026609
Replicate 20.1895919376248
Replicate 30.1806427763134
Condition 3: 24 Hour
Replicate 10.092563065638111
Replicate 20.19206619979955
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_447343.p1 GENE.S_Transcript_447343~~S_Transcript_447343.p1 ORF type:internal len:236 (+),score=48.02,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|7.4e-19,PPR_2|PF13041.2|3.4e-23,PPR_2|PF13041.2|3e-20,PPR_2|PF13041.2|9.3e-15,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|1.8e-09,PPR_1|PF12854.3|1e-09,PPR_1|PF12854.3|4.7e-17,PPR_1|PF12854.3|2.8e-13,PPR_1|PF12854.3|2.3e-14,PPR_1|PF12854.3|1.1,PPR|PF01535.16|2.6,PPR|PF01535.16|2e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|7.8e-11,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|6.9e-08,PPR|PF01535.16|3.3e+02,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|7e-07,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|4e+03,MRP-S27|PF10037.5|0.0027,MRP-S27|PF10037.5|63,MRP-S27|PF10037.5|0.033,MRP-S27|PF10037.5|0.17,ECSIT|PF06239.7|1.7e+02,ECSIT|PF06239.7|0.06,ECSIT|PF06239.7|5.5e+02,ECSIT|PF06239.7|3.3e+02,ECSIT|PF06239.7|19 S_Transcript_447343:1-705(+)
GCCTTGAACCTCTTTTCTGAAATGAAAAGCAAGGGCATCTCCCCTGATGTTGCCACCTACAATTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCTGTTGGGATGAGGCTAAGGAAGCATTGACCGAGATGTTGGAAAGCAATGTAGCGCCAGATCTCCACACATACAACACCCTTATTGATATGTATTGTAAGGATGGAAAGGTTGGTCAAGCCAGATCCATAGTTGTCTGGATGACTAAGAGGGGTGAGAAGCCTAACATTATTACCTGCAATTCCCTTTTGGATGGATACTGTTTGCGAGGCCAAATGGATGAAGCATTAGAGTTAATGTATTTGATGGAAAAAGATGGGTGCCAACCTAATGTTGTCACCTTCACCACCATCATCAATGGGTATTGCAAGAGTAAGAACCTTGATGAAGCTTTCAGGCTATTCAAGGAAATGTTTTCTAAAGGATTGAGCCCCAATGTGAATACTTATAATACTCTTATAGACGGCTTGTGCAAGGGTACTAGGCTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAAATGTTGTCACCTTTAATACTTTGGTGGATGGCCTATGTAAGGATGGACAACTTGATGAGGCTGTAACAATGTCTAAGGAGATGGAGAGGAATGGAGTGGTAAAGGATCTTGTGAGCTACAATGTGTTAATTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_447343.p1 GENE.S_Transcript_447343~~S_Transcript_447343.p1 ORF type:internal len:236 (+),score=48.02,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|7.4e-19,PPR_2|PF13041.2|3.4e-23,PPR_2|PF13041.2|3e-20,PPR_2|PF13041.2|9.3e-15,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|1.8e-09,PPR_1|PF12854.3|1e-09,PPR_1|PF12854.3|4.7e-17,PPR_1|PF12854.3|2.8e-13,PPR_1|PF12854.3|2.3e-14,PPR_1|PF12854.3|1.1,PPR|PF01535.16|2.6,PPR|PF01535.16|2e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|7.8e-11,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|6.9e-08,PPR|PF01535.16|3.3e+02,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|7e-07,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|4e+03,MRP-S27|PF10037.5|0.0027,MRP-S27|PF10037.5|63,MRP-S27|PF10037.5|0.033,MRP-S27|PF10037.5|0.17,ECSIT|PF06239.7|1.7e+02,ECSIT|PF06239.7|0.06,ECSIT|PF06239.7|5.5e+02,ECSIT|PF06239.7|3.3e+02,ECSIT|PF06239.7|19 S_Transcript_447343:1-705(+)
ALNLFSEMKSKGISPDVATYNSLLRGLCSLGCWDEAKEALTEMLESNVAPDLHTYNTLIDMYCKDGKVGQARSIVVWMTKRGEKPNIITCNSLLDGYCLRGQMDEALELMYLMEKDGCQPNVVTFTTIINGYCKSKNLDEAFRLFKEMFSKGLSPNVNTYNTLIDGLCKGTRLQLALQLFKEMQAQGITPNVVTFNTLVDGLCKDGQLDEAVTMSKEMERNGVVKDLVSYNVLID

Click here to download the sequence:
Link to NCBI Protein BLAST