Transcript Information: S_Transcript_4474.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9667675371409
Replicate 28.5457800753893
Replicate 38.5881410518054
Condition 2: 8 Hour
Replicate 115.444891055864
Replicate 216.610857573703
Replicate 316.009756784857
Condition 3: 24 Hour
Replicate 111.672480663429
Replicate 211.307588393779
Replicate 310.473102129592


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4474.p1 GENE.S_Transcript_4474~~S_Transcript_4474.p1 ORF type:complete len:932 (+),score=168.27,Agenet|PF05641.8|4.1e-13,Agenet|PF05641.8|26,PHD|PF00628.25|0.0014,PHD|PF00628.25|0.051 S_Transcript_4474:264-3059(+)
ATGAATGGGCGTAAGCTACTGCTCCATGAGAAAGTCGAGGTGCGACAAGTTGAGGATGGGTTGAGAGGGTCATGGCACCCTGGTGTGGTTGTTGGTGTGTCAGATTCATGCCGCAAGGTCAAGTATGATGAACTGCTGTGTGAAACAGGAAGCTCAAAGCTCATTGAGTCCATACCTGTGACTGAGGTGATCGAGGGTCTTTACCAACGTCCCTGTGTCAAATCAAAATATCGTGGTCGTATCAGGCCCATACCACCTCTTCCACAACCTTGTGCTATGAAGCCAAGGTTGAGTTTTGGAGTTTGTGTTGATGTCTTGTTTAAGGAAGCCTGGTGGGAAGGTGTAATTTTTGATTATGATGAGGGCGCAAATGAGCGTAGTGTTTTCTTTCCTGATGAGGGTGATGAACGCAGATTCAAATCGAGCGATTTACGTGTTACTCTTGAATGGGATGAATTTTCTGGTAGTTGGAAAGAACGGGGTGTTTGGGTGCTCGTTAATTTGGCTAAGGAGCATAAGAAGCATGGTCACATATATCAACTTATTAAGCGTGTCTGGTCCCGCATGAGAGTACATTATGGGTTTTTGAAAATGATTTCAGAATGGACTTGTGGTGCAAATTGTGTGTGGAAGGAATACTTCAGGGAAGTTATAGGTGAACTTATGTCTAAACCAATACTAACAGGTCTTAGTTTTTCAACCAATTCTAGATTACATACAGTGAGGAAAAGAGGTCGCAGACGCAAGAAGTCTTTGTATGCATCTGTTCTCACCAGGTCCATGCATAAAAAAAGGGAGAAAGAACTTGGTCTTGCAGTTAAAACAAGGCGTATGTGTTTGAGTGACTCGGAGAATGCTGTGATCTCTGCTCCCTGCCAGAGCAGCTTCTTAACTGATGTTCAGTGCACCCAAAGTCAATCGAAGGCAGCAGATGATTGCATAAATACTGGGGTTTCTGAGGCAGGTGAAGCTGGTAATTGTGATGAAGCTCCAGATATGTGCTGTGGTCAGATCATTGAAAGTGTTATGGTCAAGGGCGGAAGTTGCCAGGGGATAACAGTTCAAAATGATTGCACGCCATGTAGAAATACTGGTATTCTTGAGAATAAGTTTAAGCTGTCTCAAAGTAATGATTGCAGAAGGAAGTGGCGGTTGGTGGAAAACAAATCGACTCCAAGGAAAATGAAGCCTTCAAAAATAAGCAGCAATAAGCTTGAAAGACGTGCTATTAATGGCTCCCAAAAAACAAAGCAGGTGGATGATGCTGTTCCCTTGGAAGTTCAAAAGTACGAATCAGTTGACAGAAGAAAAGAACTGATGATACAAAGGCCAAAGAAGGATGGCATTGTGATGAGGCTTCCCCTCCATAGGCAGCGAAGAACTGTAAGAATCTCTAGACGATGCATCCGAAAGAAAAGAAGTCCCGTGAAGATAAAAAAGATAATCCATAGAAAAATTGAGAACGCTGATATGAAACCAAAACCCCCACTACAGGAAGAGCTGGAAGCATCTAAATCCTTTCAGAAAGATGATGATTCTTTGGCCAGTCATTGCCGAGGGGCTCCCCCTGTTACAGCTTCAGATCAAGTGTCTATTCCTGAAGATACTTTAAATAGTCCTCAAAAACAGAAGGGTAAAAGAGGCAGATGCCGAGATTCAGTTTGCTTTGTCTGTCAGTACGGAGGTGAACTTTTTCACTGTGATCACTGCTTGTCTTCATACCATTTGAACTGCGTTGACCTCAAGGAGGTTCCAGTGGGAAAATCGTTTTGTCCATCTTGTAGGTGTGGTTTATGTGGCTTGAATTATTCCTCCAGCAATGATCAACAATTTACTCAAGTGTGTTACCAGTGCAGTCGTCAATATCATGTGAACTGCTTAAATAAAGCAGAGATATCAGTTTCTGAAGACTCTTTTTCAGACAAGTTTTGCAGCAGAAGTTGTTTTGAGATATGTGCTCGCCTTCATGAACTCCTACAAATTTCAAACCCAACAACTGTGGAAGGCTTAATCTGGACCATCACAAGATCCAGAAGAAATGATTATAATGTGCACAATGAGCGAGTTCACCCTGTTGTTCAGGTTTCTCAAGTTTTAAATGTTTTCCATGAGTGTTTTGAACCAATTCTTGAGCCCCATACAGGAAGGGATCTTGTTGCTGATATTGTTTATAATTCAGGGTCAAAGTTTAGGAGGTTGGATTTTCATGGTTTCTATGTTATAGCCTTGGTCAATGGCGAGGAACTTGTGTGTGTTGCTACAATCAGAATTCATGGCCAAAAAGTTGCAGAAATGCCCCTGGTAGCTACGCGTTTCAAGTATCGTCGAAAGGGCATGTGCCGGGTTCTTGTTGATGAGCTTGAGAAGATGCTTGTAGAAATGGGTGTTGAAAGATTGGTCTTACCAGCTATAGCACAGCTTAGTGATACTTGGGTTTCATCGTTTGGATTTTCAGAGATGTCGACCTCTCTAAGGAAAGAATTTTTGGGATATCCATTTGTTGTTTTTCAAGGGACAACAATGTTCCACAAAATTCTCAGTAGAGCAGTTCCGGCAGAAACTTTGCAAGCATCAGAGAAACTGGAAGAAGCTGCTGCTATACTTCCGCAGGAACTTCAAGCTCAGGATGATCTCAGTAGAAGGTTCAGTCTGCGATACAAGCGAAGGCGGAAACCAGAAGCTCCCGATAAGGGTAAGACGGTGATGGATGGAAACGACAAGATTCAACCTACGTTCAAGTTGGTATACAAACGAAGGAGGATTCAGGCAAGTAGAGATTCTTTAGAAAGCCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4474.p1 GENE.S_Transcript_4474~~S_Transcript_4474.p1 ORF type:complete len:932 (+),score=168.27,Agenet|PF05641.8|4.1e-13,Agenet|PF05641.8|26,PHD|PF00628.25|0.0014,PHD|PF00628.25|0.051 S_Transcript_4474:264-3059(+)
MNGRKLLLHEKVEVRQVEDGLRGSWHPGVVVGVSDSCRKVKYDELLCETGSSKLIESIPVTEVIEGLYQRPCVKSKYRGRIRPIPPLPQPCAMKPRLSFGVCVDVLFKEAWWEGVIFDYDEGANERSVFFPDEGDERRFKSSDLRVTLEWDEFSGSWKERGVWVLVNLAKEHKKHGHIYQLIKRVWSRMRVHYGFLKMISEWTCGANCVWKEYFREVIGELMSKPILTGLSFSTNSRLHTVRKRGRRRKKSLYASVLTRSMHKKREKELGLAVKTRRMCLSDSENAVISAPCQSSFLTDVQCTQSQSKAADDCINTGVSEAGEAGNCDEAPDMCCGQIIESVMVKGGSCQGITVQNDCTPCRNTGILENKFKLSQSNDCRRKWRLVENKSTPRKMKPSKISSNKLERRAINGSQKTKQVDDAVPLEVQKYESVDRRKELMIQRPKKDGIVMRLPLHRQRRTVRISRRCIRKKRSPVKIKKIIHRKIENADMKPKPPLQEELEASKSFQKDDDSLASHCRGAPPVTASDQVSIPEDTLNSPQKQKGKRGRCRDSVCFVCQYGGELFHCDHCLSSYHLNCVDLKEVPVGKSFCPSCRCGLCGLNYSSSNDQQFTQVCYQCSRQYHVNCLNKAEISVSEDSFSDKFCSRSCFEICARLHELLQISNPTTVEGLIWTITRSRRNDYNVHNERVHPVVQVSQVLNVFHECFEPILEPHTGRDLVADIVYNSGSKFRRLDFHGFYVIALVNGEELVCVATIRIHGQKVAEMPLVATRFKYRRKGMCRVLVDELEKMLVEMGVERLVLPAIAQLSDTWVSSFGFSEMSTSLRKEFLGYPFVVFQGTTMFHKILSRAVPAETLQASEKLEEAAAILPQELQAQDDLSRRFSLRYKRRRKPEAPDKGKTVMDGNDKIQPTFKLVYKRRRIQASRDSLESL*

Click here to download the sequence:
Link to NCBI Protein BLAST