Transcript Information: S_Transcript_447459.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value4E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.098494596238905
Replicate 30
Condition 2: 8 Hour
Replicate 10.57121581206606
Replicate 20
Replicate 30.09516003395081
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_447459.p1 GENE.S_Transcript_447459~~S_Transcript_447459.p1 ORF type:5prime_partial len:224 (+),score=52.70,Skp1|PF01466.15|8.8e-29,Skp1_POZ|PF03931.11|5.1e-23 S_Transcript_447459:3-674(+)
CTTTCAAGTGGGTATTTGGTTGCTGCCTTGGTTGATCCTGGAGAGAATTCCATGATCATGTTAAGAATTCATACAAGTTTCCCCTTCTTCGCCTTCAATATCTCAATTAGGAGGACTATTTCTTCGCTCTCTCAGCGCTCTCAAGGTCAAGGAGTTCAACAAGAGCTCGTACCCCAGCCTCAAGGAGAAGTAGAAGAAGAAGCACCTTTGATAATAAGGCCTAATATGGTGAAGCTCAAGAGCTCAGATGGGGAGATGTTTGAGGTGGAAGAAGCTGTGGCTATGCAGTCTGGGATACTAGGAAGTAGGATCGAGGATGGTTGCCCTGACGATATCATCCCTCTTCCGAATGTTACCGGTCGAATACTTCTCAAGGTCATTGAATATTGTGAGAAGCACGCAAAGGAATTATCAGATGATCAGGAAGAGCTTAAGACATGGGATGCAGAGTTTGTGAAAGTTGACAAAAGTACCTTATTTGATCTGATAAATGCAGCCAACTACATGGAAATCGAAAGTCTTCTTGGCTTGACCATCCAGTTCGTAGCTCAGCAGATCGAAGGTAAAACACCTGAGGAGATCCGTCAGGTTTTCGGAGGCGCCCGTTTTACCGATATGACGGAGGAGGAGGAGGAAGAACTAAAGAGAGAGAATCCATGGGCTTTCGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_447459.p1 GENE.S_Transcript_447459~~S_Transcript_447459.p1 ORF type:5prime_partial len:224 (+),score=52.70,Skp1|PF01466.15|8.8e-29,Skp1_POZ|PF03931.11|5.1e-23 S_Transcript_447459:3-674(+)
LSSGYLVAALVDPGENSMIMLRIHTSFPFFAFNISIRRTISSLSQRSQGQGVQQELVPQPQGEVEEEAPLIIRPNMVKLKSSDGEMFEVEEAVAMQSGILGSRIEDGCPDDIIPLPNVTGRILLKVIEYCEKHAKELSDDQEELKTWDAEFVKVDKSTLFDLINAANYMEIESLLGLTIQFVAQQIEGKTPEEIRQVFGGARFTDMTEEEEEELKRENPWAFE*

Click here to download the sequence:
Link to NCBI Protein BLAST