Transcript Information: S_Transcript_448069.p1


Annotated TAIR IDAT5G40700.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 475 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 43; Metazoa - 127; Fungi - 17; Plants - 143; Viruses - 7; Other Eukaryotes - 138 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16292047-16293443 | Reverse length=303
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66532503087951
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.26656737896416
Replicate 20.55929621599317
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.14164882235217
Replicate 30.78818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_448069.p1 GENE.S_Transcript_448069~~S_Transcript_448069.p1 ORF type:internal len:160 (-),score=44.75 S_Transcript_448069:3-479(-)
GCTTTTTTTTTGGGGCAGGAAAACACCATGTATGGACTAGGAGATTCCGTATCATTTGGAAGATACATGACAGAAGACAACATGTCATGGGAAAAATGGTCATCATTCAACAACAATAGGAACCGTTATGTAGAAGAAGCAGAGAAATACTCAAAGCCAGGGTCAGTGGCTCAGAAGGCTTATTTTGAAGCCCATTTCAAGAGAATAGCAGCTCTCAAGGCTGCTGCTTTACTTGAACAAGCCCAAAATATGTCACCTGAGAATGTTGAAGATTCTGAAAAGTTGATCTCAAATGTGGAATACCAAGTGAATAATATGAACCAAGAAGATAAAGTTGAGAACAAAAGTCATGAAAACAAGGAAGAAACAGGATTTGTGGTTCATCAGAATGAGCTTTACTCAATTAATGGAGAGGTTGAGGTACTTGGAGAAGCTAATAATATTAAAGAAGTTGATGTTACAATGGAGGATAGTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_448069.p1 GENE.S_Transcript_448069~~S_Transcript_448069.p1 ORF type:internal len:160 (-),score=44.75 S_Transcript_448069:3-479(-)
AFFLGQENTMYGLGDSVSFGRYMTEDNMSWEKWSSFNNNRNRYVEEAEKYSKPGSVAQKAYFEAHFKRIAALKAAALLEQAQNMSPENVEDSEKLISNVEYQVNNMNQEDKVENKSHENKEETGFVVHQNELYSINGEVEVLGEANNIKEVDVTMEDSL

Click here to download the sequence:
Link to NCBI Protein BLAST