Transcript Information: S_Transcript_448237.p1


Annotated TAIR IDAT5G11680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3759463-3760634 | Forward length=207
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12753057547696
Replicate 30
Condition 2: 8 Hour
Replicate 10.12326815212216
Replicate 20
Replicate 30.12321299193631
Condition 3: 24 Hour
Replicate 10
Replicate 20.52401876477104
Replicate 30.14579216419142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_448237.p1 GENE.S_Transcript_448237~~S_Transcript_448237.p1 ORF type:internal len:173 (+),score=18.24 S_Transcript_448237:2-517(+)
ACAATGGTCCCTGTGCCTTTTCCTGGTGAGCGGCTGCTGTGCACGAGGCGAGGCATGAAGATAGAGATAAAGGGGATACGTGGACGCACGTGGAAAGCCAAGGGCGAGCTGTTCTTGTCAAATGTGCGCATGGTATTTGTCAGCAAGGCACCAGATGCCGATGGACTGCAAGCGGTAGATCTGCCGCTTGTATACGTGCGCAATGACCGCTTCAATCAGCCCATCTTTGGCTGCAACAACTTGTCTGGTGAATGCTGGCCTGTCAGCGATGATGGTGGCCCATCGGGCAGCCTTCCACCGCTGCCCTACAAGTTGTACTTTTACGAAGGCGGTGTAGGCACCTTCTTGCCCCTGTACTTTACCTTCATCACCGCAGCACGAGAAATGGATCGCAACCAGCGGCAGGCTGGGAAGCAGACACAGCCAGATGTGCAGTCGCACATGAGCCAGGCTTTCGTTGATCCAGACGATCCGACGCAGATCTACCTGACAGCACCGATCAGTCAGACTACTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_448237.p1 GENE.S_Transcript_448237~~S_Transcript_448237.p1 ORF type:internal len:173 (+),score=18.24 S_Transcript_448237:2-517(+)
TMVPVPFPGERLLCTRRGMKIEIKGIRGRTWKAKGELFLSNVRMVFVSKAPDADGLQAVDLPLVYVRNDRFNQPIFGCNNLSGECWPVSDDGGPSGSLPPLPYKLYFYEGGVGTFLPLYFTFITAAREMDRNQRQAGKQTQPDVQSHMSQAFVDPDDPTQIYLTAPISQTTD

Click here to download the sequence:
Link to NCBI Protein BLAST