Transcript Information: S_Transcript_448859.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9897571016957
Replicate 21.6495543594404
Replicate 31.9821632239384
Condition 2: 8 Hour
Replicate 13.6871001950183
Replicate 23.4498645098644
Replicate 32.68938264175
Condition 3: 24 Hour
Replicate 12.0415778963172
Replicate 22.9653585240081
Replicate 32.7107804734471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_448859.p1 GENE.S_Transcript_448859~~S_Transcript_448859.p1 ORF type:complete len:214 (-),score=56.37,Frigida|PF07899.7|9.6e+02,Frigida|PF07899.7|6.1e-06 S_Transcript_448859:275-916(-)
ATGGCTGATACAGAAAAAATTGTTCACATCAATTTGACATCGTCTTCTGAGTTGACTAAATCTCTAATAGAACAGCTAGGGAAGGCTTTTGTTGAGCTGGAAGCTTGCGAGGTTGCTTACTCTAGCGATGTTAAGTGGCATGATGTTGAAGAACATTTCCATCACATGGAGGCAATGATGAATAAGAAGCTTGAAGAACTTGAAGCCAAGGAGAAGATATTCGCTGAAAGAGAATCTCATAATTGTATGCTAATTGCTCAGAGAGAGGCAGCAGTAAAAAATAAGGAACAAGATCTGCTAGATAAGGTGCAGGAGCTAAAAGATGCTGCTATGGCTACCATTGCAGAAGCTAGGGGAAGTCATAAACCAGAATCCTTGGAGCCAGCCAGCACTGGGGATACAAAAGAAAACCAGGTAAGCCGCTCTATTGATGAACTTGCCCACCTTGATGCGCAAGAAGTTAAATCCCCTCTTGAGGCAGGGGACAAGCCAGAAGGTTTGGTTTTTGAGGGTGATCCTCGGGAAGAGTTGACACATTTTTGTGAGCAGATGGATTCTAAAGGGCTAATGAATATCATCATGGAAAACCTGAAAAACCTTTCTGTCGCGGAGAACCTAAAAAAACCTTTCTGTTGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_448859.p1 GENE.S_Transcript_448859~~S_Transcript_448859.p1 ORF type:complete len:214 (-),score=56.37,Frigida|PF07899.7|9.6e+02,Frigida|PF07899.7|6.1e-06 S_Transcript_448859:275-916(-)
MADTEKIVHINLTSSSELTKSLIEQLGKAFVELEACEVAYSSDVKWHDVEEHFHHMEAMMNKKLEELEAKEKIFAERESHNCMLIAQREAAVKNKEQDLLDKVQELKDAAMATIAEARGSHKPESLEPASTGDTKENQVSRSIDELAHLDAQEVKSPLEAGDKPEGLVFEGDPREELTHFCEQMDSKGLMNIIMENLKNLSVAENLKKPFCCL*

Click here to download the sequence:
Link to NCBI Protein BLAST