Transcript Information: S_Transcript_4495.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value8.4E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.779949867415
Replicate 210.053929418614
Replicate 310.972260707965
Condition 2: 8 Hour
Replicate 110.662695158566
Replicate 210.194766468736
Replicate 310.388102946731
Condition 3: 24 Hour
Replicate 111.68286490478
Replicate 211.762231324434
Replicate 38.8596421802781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4495.p1 GENE.S_Transcript_4495~~S_Transcript_4495.p1 ORF type:complete len:316 (+),score=70.50,SNAPc_SNAP43|PF09808.5|1.1e-38 S_Transcript_4495:86-1033(+)
ATGAAAAGAGTATGGCTTGGTCGGAAGTTTTCCTACATATTTGAGGCTCGACCATCAAATAACTTGGCCTTATTTATGCAATCTTTGTACAACCACTCAATCAGCTACCTGGACACCACTAAGTCGTTATCGCATAAATTGGGTGGCCTCTATTGTCTATATTTTCTCTACGAGACGCAACCTTTCAAGCCTCCTTTCAAGATATATCTATCTCTTGGAGATTTACGAAGGCTGAAAGCTCTAGTTGTGAATGCAAAGGAAAATGGAATAAAGGTTGTATCTGTTTTGGTCAAAAGGATGCTGGAAAAGAACACATTCCTCTTCGGTTTTGTCAATATAAATGAGTACTCCGAGAAAGAGAGGATAAAGGAATTGGTAGATGCACAGAATGCCTGCATACAGAAGATGCATGAAAAGTTGTTGGCTAATACTGAGATTGAGCAGTTCCTTCACATGGACATGGGCGTGGAACTTGACCTGAAGGTGCTCCAGAATATGTCTACAGAATATGAGGCAACTAAGAGTCTTGCTGTTAGAGAGGCTAGTCAGTTGGTGGATGTCGAAAATATAAAGCATATAGCAGAAGATAGGCCAACAATTGGAGATGAAGTGCAGAAGATAACTGAGGAATGGAGTAACCAAAAAGACATGTACTCTCAGCAAACGGGATTAAACCAGCGTTCTGTTGTGCCTGTTCCAGAGAGAGGAGACTCTAAAAGAAGGACCGAACAGCAGCTAGGCAATGATGATGAACAGCAAGACGGAGGTTTCTTGAAGCTCTTATTGGGAATTGATTCGCCAGAGGCCAATGGCAATGGTGAACATATTCCGACTGATCAACATTCAGTTCCTCCTGAAGGAGATGACCAGCAAGATGATGAATTTGACTATGCTAAGGAACTGGAAAATCAACTATATGAAGATATACCAAGTGATTGGGACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4495.p1 GENE.S_Transcript_4495~~S_Transcript_4495.p1 ORF type:complete len:316 (+),score=70.50,SNAPc_SNAP43|PF09808.5|1.1e-38 S_Transcript_4495:86-1033(+)
MKRVWLGRKFSYIFEARPSNNLALFMQSLYNHSISYLDTTKSLSHKLGGLYCLYFLYETQPFKPPFKIYLSLGDLRRLKALVVNAKENGIKVVSVLVKRMLEKNTFLFGFVNINEYSEKERIKELVDAQNACIQKMHEKLLANTEIEQFLHMDMGVELDLKVLQNMSTEYEATKSLAVREASQLVDVENIKHIAEDRPTIGDEVQKITEEWSNQKDMYSQQTGLNQRSVVPVPERGDSKRRTEQQLGNDDEQQDGGFLKLLLGIDSPEANGNGEHIPTDQHSVPPEGDDQQDDEFDYAKELENQLYEDIPSDWDL*

Click here to download the sequence:
Link to NCBI Protein BLAST