Transcript Information: S_Transcript_4496.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5659635776225
Replicate 27.5237162546364
Replicate 36.9691445108537
Condition 2: 8 Hour
Replicate 19.5325477454465
Replicate 211.856048818288
Replicate 310.019430671466
Condition 3: 24 Hour
Replicate 18.5567515976982
Replicate 27.8331146001201
Replicate 38.2523739758675


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4496.p1 GENE.S_Transcript_4496~~S_Transcript_4496.p1 ORF type:complete len:217 (+),score=65.43 S_Transcript_4496:1252-1902(+)
ATGCTGGAAAAGAACACATTCCTCTTCGGTTTTGTCAATATAAATGAGTACTCCGAGAAAGAGAGGATAAAGGAATTGGTAGATGCACAGAATGCTTGCATACTGAAGATGAATGAAAAGTTGTTGGCTGATACTGAGATTGGGCAGTTCCTTAACATGGACATGGGCATGGAACTTGACCTGAAGGTGCTCCAGAAAATGTCTACAGAATATGAAGCAACTAAGAGTCTTGCTGTCAGAGAGGCTAGTCAGTTGGTGGATGTCGAAAATATAAAGCATATAGCAGAAGATAGGCCAACAATTGGAGATGAAGTGCAGAAGATAACTGAGGAATGGAGTAACCAAAAAGACATGTACTCTCAGCAAACGGGATTGAAGCAGCGTTCTGTTGTGACTGTTCCAGAGAGAGGAGACTCTCAAAGAAGCACTAAACAGCAGCTAGACAATGATGATGAACAGCAAGACGGAGGTTTCTTGAAGCTCTTATTGGGAATTGATTCGCCAGAGGCTAACGGCAATGGTGAACATATTCCGATGGATCAACATTCAGTTCCTCCTGAAGGAGATGACCAGCAAGATGATGAATTTGACTATGCTAAGGAACTGGAAAATCAACTATATGAAGATATACCAAGTGATTGGGACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4496.p1 GENE.S_Transcript_4496~~S_Transcript_4496.p1 ORF type:complete len:217 (+),score=65.43 S_Transcript_4496:1252-1902(+)
MLEKNTFLFGFVNINEYSEKERIKELVDAQNACILKMNEKLLADTEIGQFLNMDMGMELDLKVLQKMSTEYEATKSLAVREASQLVDVENIKHIAEDRPTIGDEVQKITEEWSNQKDMYSQQTGLKQRSVVTVPERGDSQRSTKQQLDNDDEQQDGGFLKLLLGIDSPEANGNGEHIPMDQHSVPPEGDDQQDDEFDYAKELENQLYEDIPSDWDL*

Click here to download the sequence:
Link to NCBI Protein BLAST