Transcript Information: S_Transcript_449740.p2


Annotated TAIR IDAT3G61470.1
Annotated Gene Namephotosystem I light harvesting complex gene 2
Annotated Gene Symbol(s)LHCA2
Annotation TypeOrtholog
Chromosome Positionchr3:22745736-22747032 | Forward length=257
E-Value4.9E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40630536236917
Replicate 20
Replicate 30.14078424491298
Condition 2: 8 Hour
Replicate 10.16278923906208
Replicate 20
Replicate 30.16271639393116
Condition 3: 24 Hour
Replicate 10.83377417903031
Replicate 20.17300619523929
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_449740.p2 GENE.S_Transcript_449740~~S_Transcript_449740.p2 ORF type:5prime_partial len:131 (+),score=3.49,Chloroa_b-bind|PF00504.17|9.7e-23 S_Transcript_449740:2-394(+)
GCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACCGACGTCGGGTACCCTGGTGGTCTGTGGTTTGACCCGCTCGGCTGGGGCACCGGCTCGCCGGAGAAGATCAAGGAGCTGCGCACCAAGGAGATCAAGAACGGGCGGCTCGCCATGCTCGCCGTCATGGGAGCTTGGTTCCAGGCAGAGTACACCGGCACCGGCCCCATCGACAACCTCTTCGCCCATCTCGCCGACCCCGGCCACGCCACCATCTTCCAGGCCTTCACCCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_449740.p2 GENE.S_Transcript_449740~~S_Transcript_449740.p2 ORF type:5prime_partial len:131 (+),score=3.49,Chloroa_b-bind|PF00504.17|9.7e-23 S_Transcript_449740:2-394(+)
AGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFQAFTPK*

Click here to download the sequence:
Link to NCBI Protein BLAST