Transcript Information: S_Transcript_44977.p1


Annotated TAIR IDAT3G44880.1
Annotated Gene NamePheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain
Annotated Gene Symbol(s)ACD1, LLS1, PAO
Annotation TypeOrtholog
Chromosome Positionchr3:16383858-16386204 | Forward length=537
E-Value8E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.447468478456
Replicate 241.163842773651
Replicate 336.024332739173
Condition 2: 8 Hour
Replicate 145.845440273214
Replicate 241.827522456765
Replicate 350.759917253885
Condition 3: 24 Hour
Replicate 150.362231393685
Replicate 243.431623351561
Replicate 341.807746757119


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44977.p1 GENE.S_Transcript_44977~~S_Transcript_44977.p1 ORF type:5prime_partial len:514 (+),score=102.66,PaO|PF08417.8|3.6e-21,PaO|PF08417.8|2.3e+03,Rieske|PF00355.22|1.6e-19 S_Transcript_44977:1-1542(+)
CACCACTCCAAACCCCAGATCAGTTCTTCCAAAAGACTCTCAAATTTCCCCTATTTAAGAGTCTCAACCCCTTCAAAACCAATTTCCACTGAACAAGAACAACCCACAATTTTTGATGATGATGATGATGATGAATTCATTTCCACTGAAACTGCACAACCCAATGAATCCTCAAAGTTCACATGGAGAGACCATTGGTACCCAGTTTCTCTTATTGAAGATCTTGACCCTTCCTTACCAACCCCTTTTCAGCTCCTTGGCAGGGACTTAGTTTTATGGTTCAGCAAATCAAGTAATGAGTGGGTTGCTCTTGATGATAAATGCCCACATCGTTTAGCTCCTCTTTCTGAAGGGAGGCTTGATGAAAATGGGGACTTGCAATGCTCATATCATGGATGGTCTTTTAATGGGTGTGGTTCATGTACTAGAATCCCTCAGGCTAAATCAGATGGCCCTGAAGCTAAGGCTGTCAAGTCCTCTAGAGCATGTGCTACCAAGCTTCCTACTATGGTTTCTCAGGGTTTGCTCTTTGTTTGGCCTGATGAGAATGAGTGGGAGAGAGCTAGTGCTACTCAACCTTCTAGGTTGCCAGAAGACTTTGATAAGCCTGAGTTTGCAACAGTGTCGATCCAGCGGGATCTGTTTTATGGCTATGATACCTTGATGGAGAATGTTTCTGATCCTTCACACATTGACTTTGCACACCACAAGGTCACAGGAAGGAGGGACAGGGCCAAGCCTTTGCCATTCAAGGTTGCATCTAGTGGTCCTTGGGGCTTTGCTGGAGCAAATGATGATAATCCACGAATAAGCGCAGAATTTATTGCACCCTGTTATTATTTGAATAAGATAGAGATAGACACAAAGCTTCCTATAGTTGGAGACCAGAAGTGGGTAATATGGATTTGCTCTTTCAATATACCAATGGCACCTGGGAAGACCCGTTCAATTGTTTGCAGTGCTCGTAACTTTTTCCAATTCACAGTACCAGGCCCTAATTGGTGGCAGGTTGTACCCAGATGGCATGAACATTGGACGTCAAACAAAGTGTATGACGGAGACATGATTGTGCTTCAAGGTCAAGAGAAATTCTTTCTTTCAAAATCAGCAGAGGGTTCCGAAGATATTAACAAGCAATATACAAAAATTACGTTTACCCCTACACAGGCAGATCGCTTTGTATTGGCATTTCGTAACTGGCTGAGACGGCATGGCAATGGGCAACCTGAATGGTTTGGTACAGTGAGCCAACAGCCTTTACCATCAACAGTGCTGTCCAAACGACAGATGCTGGATAGATACGAGCAGCACACGTTGAAGTGTGCATCATGTAGAGGAGCTCACGAGGCCTTCGAGACATGGAAGAAAGTTCTTGTAGGTGCAACTGTTATCTTTTCTGCAACTGCGGGTATTCCTCCGTCGTTGCAGTTCCGAATTGTCTTGGGTGGGCTTGCAATTTTAAGTGCAGCCTTGGCTTATGCTTTGCATGAGCTGCAGAAGAACTTTGTGTTTGTTGATTATGTACATGCTGAAATTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44977.p1 GENE.S_Transcript_44977~~S_Transcript_44977.p1 ORF type:5prime_partial len:514 (+),score=102.66,PaO|PF08417.8|3.6e-21,PaO|PF08417.8|2.3e+03,Rieske|PF00355.22|1.6e-19 S_Transcript_44977:1-1542(+)
HHSKPQISSSKRLSNFPYLRVSTPSKPISTEQEQPTIFDDDDDDEFISTETAQPNESSKFTWRDHWYPVSLIEDLDPSLPTPFQLLGRDLVLWFSKSSNEWVALDDKCPHRLAPLSEGRLDENGDLQCSYHGWSFNGCGSCTRIPQAKSDGPEAKAVKSSRACATKLPTMVSQGLLFVWPDENEWERASATQPSRLPEDFDKPEFATVSIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVASSGPWGFAGANDDNPRISAEFIAPCYYLNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTVPGPNWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKFFLSKSAEGSEDINKQYTKITFTPTQADRFVLAFRNWLRRHGNGQPEWFGTVSQQPLPSTVLSKRQMLDRYEQHTLKCASCRGAHEAFETWKKVLVGATVIFSATAGIPPSLQFRIVLGGLAILSAALAYALHELQKNFVFVDYVHAEID*

Click here to download the sequence:
Link to NCBI Protein BLAST