Transcript Information: S_Transcript_449919.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4355002058634
Replicate 23.6771315929191
Replicate 34.0343485182876
Condition 2: 8 Hour
Replicate 17.5527424039846
Replicate 27.690322969906
Replicate 35.995082138901
Condition 3: 24 Hour
Replicate 14.3234665241801
Replicate 23.7773019293912
Replicate 37.0936999889389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_449919.p1 GENE.S_Transcript_449919~~S_Transcript_449919.p1 ORF type:5prime_partial len:96 (+),score=18.72,Cnd2|PF05786.10|3.6e-21 S_Transcript_449919:2-289(+)
GAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAAACTTCAAAACAAGTCAATGTGCATTTGCTGAAGGAAACACTTTGGAATCACATGCAAGGATCACTCCAGACAGCTGAAAATGAAACGAGTTTTCTCACAAAGGATGCCGTATCTTTCAAACATATACTAGCGACCTTTCCTGACGATTGCAATGCTGCTGCAAGCCAGGACATCTCCCCTCACCTATGTTTCATTTGTGTCCTGCATTTGCAAATGAACATGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_449919.p1 GENE.S_Transcript_449919~~S_Transcript_449919.p1 ORF type:5prime_partial len:96 (+),score=18.72,Cnd2|PF05786.10|3.6e-21 S_Transcript_449919:2-289(+)
EDELVSQPRQVDKVEVQYDKTSKQVNVHLLKETLWNHMQGSLQTAENETSFLTKDAVSFKHILATFPDDCNAAASQDISPHLCFICVLHLQMNMD*

Click here to download the sequence:
Link to NCBI Protein BLAST