Transcript Information: S_Transcript_45024.p1


Annotated TAIR IDAT2G17790.1
Annotated Gene NameVPS35 Homolog A
Annotated Gene Symbol(s)VPS35A, ZIP3
Annotation TypeOrtholog
Chromosome Positionchr2:7733685-7739344 | Forward length=787
E-Value7.2E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7702549383814
Replicate 23.4343021481037
Replicate 35.2196422878115
Condition 2: 8 Hour
Replicate 15.6331219705634
Replicate 24.854269044469
Replicate 35.1278689993116
Condition 3: 24 Hour
Replicate 14.8429694531034
Replicate 24.0623813202887
Replicate 37.7331739921346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45024.p1 GENE.S_Transcript_45024~~S_Transcript_45024.p1 ORF type:complete len:212 (+),score=28.83,Vps35|PF03635.13|6.4e-91 S_Transcript_45024:200-835(+)
ATGATTGCCGACGGAGTTGAAGAGGAAGAGAAATGGCTCTCCGCCGGGATCGCCGGTCTTCAACAGAACGCCTTTTACATGCATCGCGCTCTGGATTCGAACAATCTCAAAGACGCCTTGAAGTACTCCGCTCAAATGCTTTCCGAGCTTCGCACTTCTAGACTCTCTCCTCACAAGTATTATGCTCTTTATATGCGTGCATTTGACGAATTGAGGAGATTGGAGCTGTTCTTTTTTGAAGAGACCAAGCGAGGTTGTTCCATCATTGAGCTTTATGAGCTTGTACAGCATGCCGGCAACATCCTTCCTCGACTGTATCTTCTGTGTACTGTAGGATGTGTCTATATTAAATCAAAGGAAGCTCCTGCAAAAGATATCCTTAAGGATTTAGTAGAAATGTGCCGTGGCATTCAACATCCTTTACGCGGGCTCTTCTTGAGGAGTTATCTTTCTCAAGTCAGTAGGGATAAGTTACCGGATATTGGCTCCGAGTATGAAGGGGATGCTGATTCTGTCACAGATGCAGTTGAGTTTGTTCTGCAAAATTTTACAGAAATGAATAAGCTTTGGGTTCGGATGCAGTACCAGGTTATTGTGCTTGTCAATGATTCATACTGTTTGCTGATCCTGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45024.p1 GENE.S_Transcript_45024~~S_Transcript_45024.p1 ORF type:complete len:212 (+),score=28.83,Vps35|PF03635.13|6.4e-91 S_Transcript_45024:200-835(+)
MIADGVEEEEKWLSAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYALYMRAFDELRRLELFFFEETKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVTDAVEFVLQNFTEMNKLWVRMQYQVIVLVNDSYCLLILS*

Click here to download the sequence:
Link to NCBI Protein BLAST