Transcript Information: S_Transcript_45026.p1


Annotated TAIR IDAT2G17790.1
Annotated Gene NameVPS35 Homolog A
Annotated Gene Symbol(s)VPS35A, ZIP3
Annotation TypeOrtholog
Chromosome Positionchr2:7733685-7739344 | Forward length=787
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.372483265281
Replicate 218.233710378111
Replicate 317.131930047907
Condition 2: 8 Hour
Replicate 117.624289518292
Replicate 221.22552251108
Replicate 319.166646441504
Condition 3: 24 Hour
Replicate 117.728657510548
Replicate 215.658633452749
Replicate 316.467285190117


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45026.p1 GENE.S_Transcript_45026~~S_Transcript_45026.p1 ORF type:3prime_partial len:605 (+),score=124.39,Vps35|PF03635.13|2.4e-216 S_Transcript_45026:251-2062(+)
ATGATTGCCGACGGAGTTGAAGAGGAAGAGAAATGGCTCTCCGCCGGGATCGCCGGTCTTCAACAGAACGCCTTTTACATGCATCGCGCTCTGGATTCGAACAATCTCAAAGACGCCTTGAAGTACTCCGCTCAAATGCTTTCCGAGCTTCGCACTTCTAGACTCTCTCCTCACAAGTATTATGCTCTTTATATGCGTGCATTTGACGAATTGAGGAGATTGGAGCTGTTCTTTTTTGAAGAGACCAAGCGAGGTTGTTCCATCATTGAGCTTTATGAGCTTGTACAGCATGCCGGCAACATCCTTCCTCGACTGTATCTTCTGTGTACTGTAGGATGTGTCTATATTAAATCAAAGGAAGCTCCTGCAAAAGATATCCTTAAGGATTTAGTAGAAATGTGCCGTGGCATTCAACATCCTTTACGCGGGCTCTTCTTGAGGAGTTATCTTTCTCAAGTCAGTAGGGATAAGTTACCGGATATTGGCTCCGAGTATGAAGGGGATGCTGATTCTGTCACAGATGCAGTTGAGTTTGTTCTGCAAAATTTTACAGAAATGAATAAGCTTTGGGTTCGGATGCAGTACCAGGGACCTGCTCGGGAGAAGGACAGAAGAGAAAAAGAAAGGAGCGAACTTCGAGATCTTGTTGGGAAGAATCTGCATGTCCTAAGTCAGATTGAGGGAGTTGATCTTGACATGTACAGAGATACCGTTCTTCCTAGAGTACTGGAACAGGTGGTCAATTGTAAAGATGAGCTTGCTCAGTATTATCTGATGGACTGCATCATCCAAGTATTTCCTGATGAGTATCATTTGCAAACTCTTGATGTCTTATTGGGCTCTTGTGCCCAGCTTCAGCTATCTGTGGATATCAAGACAGTTCTCTCCAGTTTGATGGAAAGGCTTTCAAATTATGCTGCCTCCAGTGCAGAAGTCTTGCCAGAATTCTTACAAGTGGATGCCTTTTCAAAACTAAACAATTCAATAGGGAAGGTCATAGAAGCTCAGGCTGATATGCCTGTTGTAGCTGTTGTTACTTTGTATTCATCTCTTCTTACCTTCACCTTACATGTCCATCCTGATCGGCTTGATTATGCTGATCAAGTATTGGGGTCCTGTGTTAATAAGCTCGCTGGTGTTGGAAAACTTGATGATACCCAAGCAACAAAGCAAATAGTTACACTTCTAAGTGCTCCATTGGATAAGTATAATGATGTAATGACTGCTTTGAAGCTCTCTAACTATTTACGAGTGATGGAGTACCTTGACTATGAAACCAATAAGGTCATGGCAAAGATTATAATTCGAAACATCATGAAAAACAGCTCCTATATATCTAACAGTGATAAGGTCGACGCATTGTTTGAGTTGATAAAGGGGCTTATCAAGGACACTGATGTCACCGTTTATGATGAGGATGACGAGGAGGACTTTAAGGAGGAGCAGAATGCTGTTGCACGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACTGTTGTGCAGAAGCACATACTGGCAGGTGGTGTGAAGCGTTTACCCTTCACGGTTCCGCCCCTTGTTTTCTCCTCTCTTAAGCTGGTTAGGAGGCTTCAGAACCAAGATACAAGTAAACTTGGAGAAGCAGCTGCTTCAACACAAAAGAAAATTTACCAGTTGTTAAATCAGCTTATTGAGGCTCTCTCAAATGTTCCGGCACCTGAGCTGGCCTTGCGTCTGTACTTGCAATGCGCCGAGGCTGCAAATGATTCTGACCTTGAACCTGTTGCCTGTGAATTTTTCACTCAAGCCTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45026.p1 GENE.S_Transcript_45026~~S_Transcript_45026.p1 ORF type:3prime_partial len:605 (+),score=124.39,Vps35|PF03635.13|2.4e-216 S_Transcript_45026:251-2062(+)
MIADGVEEEEKWLSAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYALYMRAFDELRRLELFFFEETKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVTDAVEFVLQNFTEMNKLWVRMQYQGPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGSCAQLQLSVDIKTVLSSLMERLSNYAASSAEVLPEFLQVDAFSKLNNSIGKVIEAQADMPVVAVVTLYSSLLTFTLHVHPDRLDYADQVLGSCVNKLAGVGKLDDTQATKQIVTLLSAPLDKYNDVMTALKLSNYLRVMEYLDYETNKVMAKIIIRNIMKNSSYISNSDKVDALFELIKGLIKDTDVTVYDEDDEEDFKEEQNAVARLIQMLDSDEPEEMFKIITVVQKHILAGGVKRLPFTVPPLVFSSLKLVRRLQNQDTSKLGEAAASTQKKIYQLLNQLIEALSNVPAPELALRLYLQCAEAANDSDLEPVACEFFTQAY

Click here to download the sequence:
Link to NCBI Protein BLAST