Transcript Information: S_Transcript_45032.p1


Annotated TAIR IDAT2G17790.1
Annotated Gene NameVPS35 Homolog A
Annotated Gene Symbol(s)VPS35A, ZIP3
Annotation TypeOrtholog
Chromosome Positionchr2:7733685-7739344 | Forward length=787
E-Value1.8E-216
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1695381441723
Replicate 22.9377083921691
Replicate 34.3099872369284
Condition 2: 8 Hour
Replicate 15.4472464397025
Replicate 23.6475840173467
Replicate 33.996721425934
Condition 3: 24 Hour
Replicate 16.6484428014852
Replicate 24.9885020045765
Replicate 32.9471410582065


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45032.p1 GENE.S_Transcript_45032~~S_Transcript_45032.p1 ORF type:complete len:368 (+),score=58.76,Vps35|PF03635.13|4.9e-152 S_Transcript_45032:251-1354(+)
ATGATTGCCGACGGAGTTGAAGAGGAAGAGAAATGGCTCTCCGCCGGGATCGCCGGTCTTCAACAGAACGCCTTTTACATGCATCGCGCTCTGGATTCGAACAATCTCAAAGACGCCTTGAAGTACTCCGCTCAAATGCTTTCCGAGCTTCGCACTTCTAGACTCTCTCCTCACAAGTATTATGCTCTTTATATGCGTGCATTTGACGAATTGAGGAGATTGGAGCTGTTCTTTTTTGAAGAGACCAAGCGAGGTTGTTCCATCATTGAGCTTTATGAGCTTGTACAGCATGCCGGCAACATCCTTCCTCGACTGTATCTTCTGTGTACTGTAGGATGTGTCTATATTAAATCAAAGGAAGCTCCTGCAAAAGATATCCTTAAGGATTTAGTAGAAATGTGCCGTGGCATTCAACATCCTTTACGCGGGCTCTTCTTGAGGAGTTATCTTTCTCAAGTCAGTAGGGATAAGTTACCGGATATTGGCTCCGAGTATGAAGGGGATGCTGATTCTGTCACAGATGCAGTTGAGTTTGTTCTGCAAAATTTTACAGAAATGAATAAGCTTTGGGTTCGGATGCAGTACCAGGGACCTGCTCGGGAGAAGGACAGAAGAGAAAAAGAAAGGAGCGAACTTCGAGATCTTGTTGGGAAGAATCTGCATGTCCTAAGTCAGATTGAGGGAGTTGATCTTGACATGTACAGAGATACCGTTCTTCCTAGAGTACTGGAACAGGTGGTCAATTGTAAAGATGAGCTTGCTCAGTATTATCTGATGGACTGCATCATCCAAGTATTTCCTGATGAGTATCATTTGCAAACTCTTGATGTCTTATTGGGCTCTTGTGCCCAGCTTCAGCTATCTGTGGATATCAAGACAGTTCTCTCCAGTTTGATGGAAAGGCTTTCAAATTATGCTGCCTCCAGTGCAGAAGTCTTGCCAGAATTCTTACAAGTGGATGCCTTTTCAAAACTAAACAATTCAATAGGGAAGGTACGCATGGCAGGATTGCTTTCTCAATGTTGTGCGATCTTGAAAATAGATCTGGAAACGCTTCTCTCAAATACCTTATGTTGTGTTCCTCATATTAACAGCAGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45032.p1 GENE.S_Transcript_45032~~S_Transcript_45032.p1 ORF type:complete len:368 (+),score=58.76,Vps35|PF03635.13|4.9e-152 S_Transcript_45032:251-1354(+)
MIADGVEEEEKWLSAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYALYMRAFDELRRLELFFFEETKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVTDAVEFVLQNFTEMNKLWVRMQYQGPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGSCAQLQLSVDIKTVLSSLMERLSNYAASSAEVLPEFLQVDAFSKLNNSIGKVRMAGLLSQCCAILKIDLETLLSNTLCCVPHINSSR*

Click here to download the sequence:
Link to NCBI Protein BLAST