Transcript Information: S_Transcript_4504.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.28903217760936
Replicate 30
Condition 2: 8 Hour
Replicate 10.18624795036797
Replicate 20.39077464872885
Replicate 30.93082303951884
Condition 3: 24 Hour
Replicate 10
Replicate 20.6927802665259
Replicate 30.88111945520056


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4504.p1 GENE.S_Transcript_4504~~S_Transcript_4504.p1 ORF type:3prime_partial len:229 (+),score=51.59,SNAPc_SNAP43|PF09808.5|0.00036,SNAPc_SNAP43|PF09808.5|4.8e-10 S_Transcript_4504:86-769(+)
ATGAAAAGAGTATGGCTTGGTCGGAAGTTTTCCTACATATTTGAGGCTCGACCATCAAATAACTTGGCCTTATTTATGCAATCTTTGTACAACCACTCAATCAGAGATTTACGAAGGCTGAAAGCTCTAGTTGTGAATGCAAAGGAAAATGGAATAAAGGTTGTATCTGTTTTGGTCAAAAGGATGCTGGAAAAGAACACATTCCTCTTCGGTTTTGTCAATATAAATGAGTACTCCGAGAAAGAGAGGATAAAGGAATTGGTAGATGCACAGAATGCCTGCATACAGAAGATGCATGAAAAGTTGTTGGCTAATACTGAGATTGAGCAGTTCCTTCACATGGACATGGGCGTGGAACTTGACCTGAAGGTGCTCCAGAATATGTCTACAGAATATGAGGCAACTAAGAGTCTTGCTGTTAGAGAGGCTAGTCAGTTGGTGGATGTCGAAAATATAAAGCATATAGCAGAAGATAGGCCAACAATTGGAGATGAAGTGCAGAAGATAACTGAGGAATGGAGTAACCAAAAAGACATGTACTCTCAGCAAACGGGATTAAACCAGCGTTCTGTTGTGCCTGTTCCAGAGAGAGGAGACTCTAAAAGAAGGACCGAACAGCAGCTAGGCAATGATGATGAACAGCAAGACGGAGGTTTCTTGAAGCTCTTATTGGGAATTGATTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4504.p1 GENE.S_Transcript_4504~~S_Transcript_4504.p1 ORF type:3prime_partial len:229 (+),score=51.59,SNAPc_SNAP43|PF09808.5|0.00036,SNAPc_SNAP43|PF09808.5|4.8e-10 S_Transcript_4504:86-769(+)
MKRVWLGRKFSYIFEARPSNNLALFMQSLYNHSIRDLRRLKALVVNAKENGIKVVSVLVKRMLEKNTFLFGFVNINEYSEKERIKELVDAQNACIQKMHEKLLANTEIEQFLHMDMGVELDLKVLQNMSTEYEATKSLAVREASQLVDVENIKHIAEDRPTIGDEVQKITEEWSNQKDMYSQQTGLNQRSVVPVPERGDSKRRTEQQLGNDDEQQDGGFLKLLLGIDS

Click here to download the sequence:
Link to NCBI Protein BLAST