Transcript Information: S_Transcript_45050.p1


Annotated TAIR IDAT5G44180.1
Annotated Gene NameHomeodomain-like transcriptional regulator
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17783172-17789872 | Forward length=1694
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.868687844471
Replicate 229.202973164313
Replicate 331.516867485331
Condition 2: 8 Hour
Replicate 135.055436137753
Replicate 233.940852559585
Replicate 330.197450773724
Condition 3: 24 Hour
Replicate 138.116329241294
Replicate 230.153735607572
Replicate 329.785622074307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45050.p1 GENE.S_Transcript_45050~~S_Transcript_45050.p1 ORF type:3prime_partial len:1752 (+),score=511.80,DDT|PF02791.13|1.8e-18,Homeobox|PF00046.25|3.6e-16,HARE-HTH|PF05066.9|1e-14,WHIM3|PF15614.2|2.6e-10,WHIM2|PF15613.2|1.5e-05 S_Transcript_45050:852-6104(+)
ATGGAAGGGGGTTCTGAAGGAGAGAAGAAACCCCCTCAAAGTGGTGGTGGTGGTGAGCCTAAGGTTAAGAGAAAGATGAAGACTGCTTCTCAGCTTGAGGTTCTTGAGAAAACTTATCAAGTTGAGACATACCCATCAGAATCTTTGAGGGCAGAGCTTTCAGCCCAGTTAGGGTTAACAGATCGACAATTGCAGATGTGGTTTTGTCACAGGCGGTTGAAGGACAAGAAGGTGACGTCAGGAGGATCGTCGGGAAAGCGGTCCAGGAAGGGGGAGGCGTCACCGGCCACGGCTCCAACAACCTCCACCCCAGCTCCTGGCCCCACACCTCCTCTCCCGCCACCTCCTGTGGTGGGTAAGGAGGAGATGCTGGGGGTTGAGTTCGGGAATGAGCATGGGTCCGGTTCTAATTCCGGTTCCAGCCCTTATAGGCACATGGACCCTCGGCATGGGGGCTATGCTCCTCGCCCTGGGGTTGCTGTGCCTAGGATTAGTGGACATGGGAGGTACTATGAGCCTCCTCCTCAGTCTATAGCTGAGCTTCGGGCTATTGCTTTTGTGGAGGCACAGCTTGGTGAGCCTTTGAGGGAAGATGGCCCTGCTCTTGGGATGGAATTTGATCCTTTGCCTCCGGGTGCTTTTGGTGCTCCAATTGCAACATCAACGGCACCACAAAAGCCAGTTGGACGAGGTTATGAAGCTTCAATGTATGAGCGTACGGATGCTAAGCCTGTCAAGGGTCCTGGGAGAGCTGTACATGAATACCAATTTCTTCCAGAGCAACCAACTGTTAGAAGTGATTCTTATGAAAGAGTTGCTCAATCTCATTACTATGGCTCACCTTCTGATGGGCCAGGGACTAAGACTCCTCCAGTTTCTGGTGGGCGCTCGTACATGCATGGTTACGAAGAAGCACCTGCGGCATATGGTATGTCAGGTCAGGTTCCAAGTCTGAGCTTAATGTCCCAACAGGGCAAGACTGGGCCCCCAGTTCCTTCTGCTTCAGGAGACTATGATAGCGTTGCACGAAAATCTCCCTATATGGGTATGGAATCACCTTACAGTGCACATCCAATCACGGGACTAGAAAATGCACTCGTGCCATCTGAAAGACGTATCATACAAGAGGACGATGTCGGGAGGGTTGAGAGGAAGCGGAAGAGCGAAGAAGCAAGAATAGCCAAGGAAATTGAAGCCCATGAGAAAAGAATGAGGAAAGAGTTAGAGAAGCAAGATATTCTCAGGCGTAAGAGAGAGGAACAAATGAGAAAAGAAATGGAGAGGCAAGACCGTGAGCGCAGGAAGGAAGAGGAGAGGCTGTTACGTGAAAAGCAGCGAGAAGAGGAACGATACCAGAGGGAACAAAGACGTGAAATGGAAAGAAGAGAGAAGTTTTTGCTGAAAGAGTCTATTAGGGCTGAGAAAATGAGGCAAAAGGAAGAGCTTCGCAGAGAAAGAGAAGCAGCAAGACAGAAAGCTGCTAATGATAGAGCTGTTGCTCGCAGACTTGCTAAAGAGTCAATGGAGCTTATTGAAGATGAGAGATTGGAGCTTATGGAAATAGCTGCTTTAAAGAAGGGCTTGCCATCCATCTTGTCTCTTGATAGTGAAACTTTACAAAATCTTGATTCATTTAGAGATATGCTGCGGTTGTTCCCACCAAATTCTGTGCATTTGAAGAAGCCTTTTGCAATACAGCCATGGATGGGTTCTGAAGAGAATGTTGGCAATCTTCTGATGGTTTGGAGATTTCTGATAACTTTTGCTGATGTTCTTGGATTGTGGCCGTTCACTCTTGATGAGTTTGTACAAGCATTTCATGATTATGATCCTCGATTACTAGGAGAAATACATGTAGCTCTTCTGCGAACCATAATAAAGGACATTGAGGATGTTGCTAGAACACCTTCATCTGGGCTGGGTGCAAATCAGAATAGTGCAGCTAATCCTGGTGGTGGACATCCACATATAGTTGAAGGGGCATATGCTTGGGGCTTTGATATACGCAGCTGGCACCGCAACTTGAACCCAATGACATGGCCAGAAATTCTGCGGCAGTTTGCTCTATCTGCAGGTTTTGGGCCAAAACTGAAGAAAAGGAATTCTGAACAACCATATTCTCGTGACGATAATGAGGGTAATGATGGTATCAACATAATATCTAATTTGCGTACTGGAGCAGCAGTTGAAAATGCTGTTGCTATTATGAGAGAGAGGGGATACTCTAATCCACGGAGATCAAGGCACAGATTAACCCCTGGCACAGTCAAGTTTGCGGCATTTCATGTTCTTTCTCTTGAGGGAGGCAATGGTCTAAATATCTTGGAAGTTGCTGATAGGATACAGAAATCTGGACTCCGTGACCTAACCACTAGCAAGACACCAGAAGCGTCTATTGCCGCAGCATTGTCAAGGGATACAAAACTTTTTGAGAGAACTGCTCCTTCAACATATTGTGTACGTTCTCCTTACAGGAAGGATCCTGCTGATGCAGAGGCTATACTTTCTACAGCTAGAGAGAAAATTAGGGTGTTTAAGAGCGGGTTTGTTGACGGGGTGGAGGCCGATGTCGATGGGGTGGAGGCTGATGATGTCGAGAAAGATGAAGAATCTGAAAGTGATACTGCTGAAGATCCTGAGGTTGATGATTTGGGTGCTGAGCTAACCCCAAATAAAGATGAAGATCCTAATTATGATGTGAACAGATCTGAACCAGATACTCGGTCTGGTGATGGAATTGGGGATTTGCATGCTAGTGCAGTGGCTAACACACCTAATGGAGTTGGGAATGCTGTTGAAGAATTATCTCCAGTTCATGTGGAAAGCTTTAAGGAGCTGAATGATAATGGATGTTCTGTTGAGGAATCTATGGATGTTAGTGGAATGTGCCTTGAAGGAGGTAACACTGATCATGAAGACACTGATATTGATGAAAGCTGTCCTGGTGAACCTTGGGTTCAAGGACTTATGGAGGGGGAATACTCTAATCTTAGTGTGGAAGAGCGCCTTAATGCTCTTGCTTCCCTAATTGGTGTGGCTACTGAGGGAATCTCAATTCGAATTGTTCTGGAGGAACGTCTAGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAACTTGACAAACGACGTCTGAAAGAGGAATATCTAATGAAGACACCCTATCCAATGTTCCCCCCCAGCAAGATGGAATTGATGTCTGCTTCTGATTGTCGGCGGAGTCCGTTGGTCGCCTCAGATGAAAATAATAATGAGACATTGATGAGCACTGCAGCACAGCAAAAACCTTTTAATGATCCTAACAATGATAATAATACACACGCTGATCTGACGGAGAAGAATTTAACAACTCCTGATTTCTCTGTTGGTCCTGAGAATCTTGCTCTGCAACAGTCTGTTTATGCTGCTGAGAGGTCTCGTGCTCAGATGAAAACTTATATAGGACACAAAGCTGAAGAAATGTATGTTTATAGGTCCTTGCCTCTTGGTCAGGATCGCCGTCGCAACAGATACTGGCAGTTTATAGCATCGGCTTCTTGCAATGATCCTGGTGCTGGAAGAATTTTTGTTGAGTTGTATAATGGTGGTTGGAGGCTCATTGACTCTGAAGAGGCTTTTGATGCTCTGCTTGGTTCCCTGGATGTACGTGGGGTTAGAGAGTCCCATTTGCATGCATTGCTCCAAAAGGTTGAGCCTCTGTTCAAGGAGTCTATTAGGAAGAAGTTAGATAGCAGGGGTGGTGGACACAATGATAAATCTGTCAAAACAGAAGCTCCTGAAGTTCCTTCCAACCCTGAATGTAGTGGTGGTACAGATAGCCCAAACAGTACTGTTTGTGCTTCTAATTCAGAGACACCAGAACCCTCAACATCTTTTCAGATTGAGAGTGGAAGAAACAGCCTGGAAATAAAGAATGCCTTGAGGCGGTACAAAAATTTTGAGGACTGGATGTGGAGAGAATGTTTCTCCTCCATTTTATGCGCCACAAAGTATGGGAAGAAACGTTGCACACAATTGGTGCACATGTGTGATTCATGCCATGATCTTTATTCTTTTGAAGACAACCACTGTCCTACTTGCAATTGCACAGTATTTGAGAAGAAATTCAATTTCTCTGAGGACATTGCACAGTGTGAAGAGACTAAGGTCCATCAGGAGCGGACCCTTCATCGTTCAGATTATTCTCCGCCAAGGATAAGACTGCTCAAGGCCCTATTAGGTCTGGTGGAGGTTTGCATTCCTCATGAAGCTCTCCAACCGTTCTGGTCAAATGGCTACCGGAAGTCCTGGGGCATGAAGCTATATATGTCATCATCAGCAGAAGATCTTCTTAAGGTTCTGACACTGCTTGAGGGAGCAATAAAGAGGGACTTCCTGACTTCAAACTTCCAGACTACCAGTGAATTAATGATTTCTGGTAACAGCGTAGGATCTTTTATCAGTGATGCCTCCAAACTTGAGAGCGTATCTGTTCTTCCTTGGATACCACAGACAACTTCTGCAGTGGCTTTGCGGCTTATGGAACTTGATTCAGCTGTTTCATACCTGCCAGATCAGAAAATGGAGACTTCAAAAGATACAGAGGCTAGGCATTTCATCAAGCTTCCTTCCAAATACACCGTTAGGAATATCCAAGATGATGAGCTTGCTGGTCTTCATGGTGAGCAACTACAGGAAGATTCTTGGCTTGAAGCGGGGAGTGAACACCTTGGTTTTGCCTCTGTACGTGGCCGAGGACGGGGTCGTGGCAGCCGAACCCGTGGTGGGAGATCCCAGAGGAGAGTTACTGGTTTGAGGGGTGAACCTAGCAGAAGTGTAGCCTCCAGTGAGAGGCTAGGTCAGGTACTTGGTGGGTGGAAGGGCCGCAATACTCGCGGCAAAGGAGGTCGAAAACGCGGTCGCCGCTCTGTCAGAAGTAGGCAGAAACCTGGAAAGAAGCCAACCACCGTAGCTGGTGGGAGGAGTCTACCTGAACCGGTTATCTATGAAAAATCTCCTCCTGGATTCTCAGCGAGAGACGAATGGAATGATGAAGATAGCAGGCAAATGCAGGTGGAGGGGATCGATGTCAATGATGATAGTAATTCCGAGAGATCCGAGTATGAAGATGATAATGGCCAAGCCTCAGGGGATGAATATGATGACATGGCAATTGATGACTATGCTGCCGTGTATAATGGCAAACCAAGTCATTTGATGGATGGAAGTGATTATAACGTAGATGACGATGAAGAGGGTGATGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45050.p1 GENE.S_Transcript_45050~~S_Transcript_45050.p1 ORF type:3prime_partial len:1752 (+),score=511.80,DDT|PF02791.13|1.8e-18,Homeobox|PF00046.25|3.6e-16,HARE-HTH|PF05066.9|1e-14,WHIM3|PF15614.2|2.6e-10,WHIM2|PF15613.2|1.5e-05 S_Transcript_45050:852-6104(+)
MEGGSEGEKKPPQSGGGGEPKVKRKMKTASQLEVLEKTYQVETYPSESLRAELSAQLGLTDRQLQMWFCHRRLKDKKVTSGGSSGKRSRKGEASPATAPTTSTPAPGPTPPLPPPPVVGKEEMLGVEFGNEHGSGSNSGSSPYRHMDPRHGGYAPRPGVAVPRISGHGRYYEPPPQSIAELRAIAFVEAQLGEPLREDGPALGMEFDPLPPGAFGAPIATSTAPQKPVGRGYEASMYERTDAKPVKGPGRAVHEYQFLPEQPTVRSDSYERVAQSHYYGSPSDGPGTKTPPVSGGRSYMHGYEEAPAAYGMSGQVPSLSLMSQQGKTGPPVPSASGDYDSVARKSPYMGMESPYSAHPITGLENALVPSERRIIQEDDVGRVERKRKSEEARIAKEIEAHEKRMRKELEKQDILRRKREEQMRKEMERQDRERRKEEERLLREKQREEERYQREQRREMERREKFLLKESIRAEKMRQKEELRREREAARQKAANDRAVARRLAKESMELIEDERLELMEIAALKKGLPSILSLDSETLQNLDSFRDMLRLFPPNSVHLKKPFAIQPWMGSEENVGNLLMVWRFLITFADVLGLWPFTLDEFVQAFHDYDPRLLGEIHVALLRTIIKDIEDVARTPSSGLGANQNSAANPGGGHPHIVEGAYAWGFDIRSWHRNLNPMTWPEILRQFALSAGFGPKLKKRNSEQPYSRDDNEGNDGINIISNLRTGAAVENAVAIMRERGYSNPRRSRHRLTPGTVKFAAFHVLSLEGGNGLNILEVADRIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRSPYRKDPADAEAILSTAREKIRVFKSGFVDGVEADVDGVEADDVEKDEESESDTAEDPEVDDLGAELTPNKDEDPNYDVNRSEPDTRSGDGIGDLHASAVANTPNGVGNAVEELSPVHVESFKELNDNGCSVEESMDVSGMCLEGGNTDHEDTDIDESCPGEPWVQGLMEGEYSNLSVEERLNALASLIGVATEGISIRIVLEERLEAANALKKQMWAEAQLDKRRLKEEYLMKTPYPMFPPSKMELMSASDCRRSPLVASDENNNETLMSTAAQQKPFNDPNNDNNTHADLTEKNLTTPDFSVGPENLALQQSVYAAERSRAQMKTYIGHKAEEMYVYRSLPLGQDRRRNRYWQFIASASCNDPGAGRIFVELYNGGWRLIDSEEAFDALLGSLDVRGVRESHLHALLQKVEPLFKESIRKKLDSRGGGHNDKSVKTEAPEVPSNPECSGGTDSPNSTVCASNSETPEPSTSFQIESGRNSLEIKNALRRYKNFEDWMWRECFSSILCATKYGKKRCTQLVHMCDSCHDLYSFEDNHCPTCNCTVFEKKFNFSEDIAQCEETKVHQERTLHRSDYSPPRIRLLKALLGLVEVCIPHEALQPFWSNGYRKSWGMKLYMSSSAEDLLKVLTLLEGAIKRDFLTSNFQTTSELMISGNSVGSFISDASKLESVSVLPWIPQTTSAVALRLMELDSAVSYLPDQKMETSKDTEARHFIKLPSKYTVRNIQDDELAGLHGEQLQEDSWLEAGSEHLGFASVRGRGRGRGSRTRGGRSQRRVTGLRGEPSRSVASSERLGQVLGGWKGRNTRGKGGRKRGRRSVRSRQKPGKKPTTVAGGRSLPEPVIYEKSPPGFSARDEWNDEDSRQMQVEGIDVNDDSNSERSEYEDDNGQASGDEYDDMAIDDYAAVYNGKPSHLMDGSDYNVDDDEEGDD

Click here to download the sequence:
Link to NCBI Protein BLAST