Transcript Information: S_Transcript_450826.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.32933457292144
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_450826.p1 GENE.S_Transcript_450826~~S_Transcript_450826.p1 ORF type:internal len:112 (+),score=-3.96,gag_pre-integrs|PF13976.2|1e-09 S_Transcript_450826:2-334(+)
TCTCGGCACCACCAACCCCATTGCCGCCTTCCCACATACAGGTTCACGGACCTTTCGACAGGGACACCACTAATGCGATGTGATAGCGTCGGTGACCTATATCCTCTCAACAACATATCAAGTCATCTAGCTCTCTATTCCATCTTGTGGCATGATCATTTGGGACATCCAGGAGCAATTATTTTAAACTCCCTGAGGACTAGTAATTTCATCCACTTTTCTAATACGTCCAAGAACTCAGTTTGTAAATCCTGTGTTTTTGGAAAACATGTTAAGTTGCCTTTTTCTCCTTCTTATTCATATACTATGCCCTTTGATATAATACATAGTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_450826.p1 GENE.S_Transcript_450826~~S_Transcript_450826.p1 ORF type:internal len:112 (+),score=-3.96,gag_pre-integrs|PF13976.2|1e-09 S_Transcript_450826:2-334(+)
SRHHQPHCRLPTYRFTDLSTGTPLMRCDSVGDLYPLNNISSHLALYSILWHDHLGHPGAIILNSLRTSNFIHFSNTSKNSVCKSCVFGKHVKLPFSPSYSYTMPFDIIHSD

Click here to download the sequence:
Link to NCBI Protein BLAST