Transcript Information: S_Transcript_45112.p1


Annotated TAIR IDAT5G10690.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3374443-3377332 | Reverse length=580
E-Value6E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7096984468205
Replicate 25.9368960991131
Replicate 37.5112234231391
Condition 2: 8 Hour
Replicate 14.8854530544705
Replicate 26.2641176191234
Replicate 36.2009738487219
Condition 3: 24 Hour
Replicate 16.9109267770243
Replicate 26.0162118002668
Replicate 34.4023932052566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45112.p1 GENE.S_Transcript_45112~~S_Transcript_45112.p1 ORF type:complete len:275 (+),score=54.05,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|0.0031,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.85,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|4.4e-06,PPR_3|PF13812.2|0.00084,PPR|PF01535.16|7.2e-05,PPR|PF01535.16|0.044,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.012,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|8.8e-06,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.01 S_Transcript_45112:220-1044(+)
ATGCATTATCAACTTTTCAATTCTTCACCCTACAAACTAATTCCAATCTCAACCATCTTTCCCATTTCTACCCTTCTATCTTCCCACCAATACTATCACAACCATGGCTACCCTTCAATCCTTAGTTATCATGTTTCTTCACTCAGAAAGTCCCGCCGTCCTTCCAAATCCACTCTCAAACGCCTCACTTCTCGTGTTGTTCTGCTCACTCGCCGCAAACAACTCCACCAGGTTTTTGAAGAGATTGAGCTAGCGAAACGGAAATATGGAGGGCTGAATACTATTGTGATGAACGCGGTGCTGGAGGCGTGTGTTCACTGTGGTGACATTGATTCTGCCCTTAGCTTGTTTGATGAGATGTCTAGCTCTAGGAGTTGCTGTGTTGATAATGTATCTTATGCCATTCTTTTGAAGGGTTTGGGTATGGCTCGAAGAGTTGATGAAGCATTTCAACTTCTTGAATCTGTGGATCGGGGCAATGCTGCTGGAAATCCAAAGTTATCCGTGCCACTTCTCCATGGTCTGCTTAATGCACTTATTGATGCAGGAGATTTACGACGTGCTAATGTTCTTCTTGCACGCTACGGATTTGTGTTCCTTGAAGGTGGCAATCATTCCATCTTGATCTACAACTTGTTAATGAAGGGTTATATTACAACAGGGTCGCCAGAGGCTGCATTCACTGTTCATAATGAAATGCTACGACAAGGATTAAGGCCTGACAGACTTGCCTATAACACCCTAATCCTTGCTGCGGTGAAGACAAAGAAAAAGGATGCTGCAATGCAGTTCTTGGAGGAAATGAAGGTCTCAAGCAAGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45112.p1 GENE.S_Transcript_45112~~S_Transcript_45112.p1 ORF type:complete len:275 (+),score=54.05,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|0.0031,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.85,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|4.4e-06,PPR_3|PF13812.2|0.00084,PPR|PF01535.16|7.2e-05,PPR|PF01535.16|0.044,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.012,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|8.8e-06,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.01 S_Transcript_45112:220-1044(+)
MHYQLFNSSPYKLIPISTIFPISTLLSSHQYYHNHGYPSILSYHVSSLRKSRRPSKSTLKRLTSRVVLLTRRKQLHQVFEEIELAKRKYGGLNTIVMNAVLEACVHCGDIDSALSLFDEMSSSRSCCVDNVSYAILLKGLGMARRVDEAFQLLESVDRGNAAGNPKLSVPLLHGLLNALIDAGDLRRANVLLARYGFVFLEGGNHSILIYNLLMKGYITTGSPEAAFTVHNEMLRQGLRPDRLAYNTLILAAVKTKKKDAAMQFLEEMKVSSKY*

Click here to download the sequence:
Link to NCBI Protein BLAST