Transcript Information: S_Transcript_45115.p1


Annotated TAIR IDAT5G10690.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3374443-3377332 | Reverse length=580
E-Value1.8E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.222909362086
Replicate 214.301287042168
Replicate 317.751884406202
Condition 2: 8 Hour
Replicate 116.497655375632
Replicate 217.890191664667
Replicate 314.233709312773
Condition 3: 24 Hour
Replicate 116.650497514003
Replicate 215.945873942968
Replicate 319.060307172596


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45115.p1 GENE.S_Transcript_45115~~S_Transcript_45115.p1 ORF type:complete len:614 (+),score=122.42,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|6e-08,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|2.2e+02,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.00092,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|38,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.032,PPR|PF01535.16|2.3,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|0.78,PPR|PF01535.16|1.5e+03,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.6e+03 S_Transcript_45115:219-2060(+)
ATGCATCATCAACTTTTCAATTCTTCACCCTACAAACTAATTCCAATCTCAACCATCTTTCCCATTTCTACCCTTCTATCTTCCCACCATCACAGCCTTGGCTATGTCTATACTTATGCAGTACATTACCCTTCAATCCTTAGTTATCATGTTTCTTCACTCAGAAAGTCCCGCCGTCCTTCCAAATCCACTCTCAAACGCCTCACTTCTCGTGTTGTTCTGCTCACTCGCCGCAAACAACTCCACCAGGTTTTTGAAGAGATTGAGCTAGCGAAACGGAAATATGGAGGGCTGAATACTATTGTGATGAACGCGGTGCTGGAGGCGTGTGTTCACTGTGGTGACATTGATTCTGCCCTTAGCTTGTTTGATGAGATGTCTAGCTCTAGGAGTTGCTGTGTTGATAATGTATCTTATGCCATTCTTTTGAAGGGTTTGGGTATGGCTCGAAGAGTTGATGAAGCATTTCAACTTCTTGAATCTGTGGATCGGGGCAATGCTGCTGGAAATCCAAAGTTATCCGTGCCACTTCTCCATGGTCTGCTTAATGCACTTATTGATGCAGGAGATTTACGCCGTGCTAATGGTCTTCTTGCACGCTATGGATTTGTGTTCCTTGAAGGTGGCAATCATTCCATCTTGATCTACAACTTGTTAATGAAGGGTTATATTACAACAGGGTCGCCAGAGGCTGCATTCACTGTTCATAATGAAATGCTACGACAAGGATTAAGGCCTGACAGACTTGCCTATAACACCCTAATCCTTGCTGCGGTGAAGACAAAGAAAAAGGATGCTGCAATGCAGTTCTTGGAGGAAATGAAGGATGCTGCATTGAAGCATGATTCTAATGATCTTCTCCCAGACAATGTTACATATACTACTTTATTGAAGGCTGCTGGACTTGCTAAAGATATTCATCTGGTTCAGAAGATAGTGATGGAAATGAAAATGTCTCAAGCATTATCTATCGATCGCATTGCTTATACTGCACTAGTTGATGCACGGCTTTGTTGTGGCTCAATCAATGGTGCTTTATGTGTGTTTGGAGAAATATTAAAGAAGGCTGGAGAAAACTCAGATATGAAGCCGAAGCCTCATCTTTATATTTCATTGATGCATGCTTTGGCATGCAAAGGTGATTTCTCTATGGTTAAGAATTTACATAAGCGCATGTGGCTGGATGCTTCAGGGACCATCACTCATGCAGTTCAGGAAGAAGCTGATCACCTCCTGATGCAAGCTGCTTTAAATGCTGGCCAGGTTGAAGTGGCTATCCAAATACTTTCAGACATTAATGCAAGATGGAAAGGAATATCTTGGACAAGTCCTGGAGGCCTGGCTGCTGTACGTTTAGAGGCTTTGCTGGGCTTATCAAAGTCCATATTTCATCCTTACTTTCTTCCCAAGGTATCAGTGGATGATCCTGTGGAGAGTATCATGGTTCCGTTTGAAGAAACCCGGCCTTTACAAGCTGCATTAGTACTGAAGAAGGTGATCATGAGGTTCTTCAAGGAATCAGTCGTGCCCATTGTAGACGACTGGGGCAACTGCGTGGGGCTTCTTCATCGTGAAGACTGCACTGAGTTAAATTCACCACTCTCAGCAATGATGAGGAGCCCGCCTCCTTTCGTAACAGCCTCTACATCAGCTGGTCGTGTTATAGATTTAATCTTGGAAAAGAATTACAAAATGGTTATTATTGTAAAATATCGCAACACATACAGCTCTCACAGTTCTAGGGCTGTGGGGGTTTTCACTTCTGAGCATTTGCACAAGCTTATTTTACCTGCATCAAAGGTGCCAGGCCAAACTACATCGTTCTTTGTAAGATCTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45115.p1 GENE.S_Transcript_45115~~S_Transcript_45115.p1 ORF type:complete len:614 (+),score=122.42,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|5.2e+03,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|6e-08,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|2.2e+02,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.00092,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|38,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.032,PPR|PF01535.16|2.3,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|0.78,PPR|PF01535.16|1.5e+03,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.6e+03 S_Transcript_45115:219-2060(+)
MHHQLFNSSPYKLIPISTIFPISTLLSSHHHSLGYVYTYAVHYPSILSYHVSSLRKSRRPSKSTLKRLTSRVVLLTRRKQLHQVFEEIELAKRKYGGLNTIVMNAVLEACVHCGDIDSALSLFDEMSSSRSCCVDNVSYAILLKGLGMARRVDEAFQLLESVDRGNAAGNPKLSVPLLHGLLNALIDAGDLRRANGLLARYGFVFLEGGNHSILIYNLLMKGYITTGSPEAAFTVHNEMLRQGLRPDRLAYNTLILAAVKTKKKDAAMQFLEEMKDAALKHDSNDLLPDNVTYTTLLKAAGLAKDIHLVQKIVMEMKMSQALSIDRIAYTALVDARLCCGSINGALCVFGEILKKAGENSDMKPKPHLYISLMHALACKGDFSMVKNLHKRMWLDASGTITHAVQEEADHLLMQAALNAGQVEVAIQILSDINARWKGISWTSPGGLAAVRLEALLGLSKSIFHPYFLPKVSVDDPVESIMVPFEETRPLQAALVLKKVIMRFFKESVVPIVDDWGNCVGLLHREDCTELNSPLSAMMRSPPPFVTASTSAGRVIDLILEKNYKMVIIVKYRNTYSSHSSRAVGVFTSEHLHKLILPASKVPGQTTSFFVRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST