Transcript Information: S_Transcript_45119.p1


Annotated TAIR IDAT5G10690.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3374443-3377332 | Reverse length=580
E-Value3E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1064344606996
Replicate 22.6833122434815
Replicate 32.9195064842765
Condition 2: 8 Hour
Replicate 12.4701224305559
Replicate 21.2956669096367
Replicate 31.3991096883578
Condition 3: 24 Hour
Replicate 11.6446920002571
Replicate 21.7063487480262
Replicate 32.1424130382724


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45119.p1 GENE.S_Transcript_45119~~S_Transcript_45119.p1 ORF type:3prime_partial len:518 (+),score=105.84,PPR_2|PF13041.2|3.7e-10,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|0.00079,PPR_2|PF13041.2|1.8e+02,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|0.00074,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|31,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.098,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.026,PPR|PF01535.16|1.3,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|1.3e+03 S_Transcript_45119:219-1769(+)
ATGCATCATCAACTTTTCAATTCTTCACCCTACAAACTAATTCCAATCTCAACCATCTTTCCCATTTCTACCCTTCTATCTTCCCACCATCACAGCCTTGGCTATGTCTATACTTATGCAGTACATTACCCTTCAATCCTTAGTTATCATGTTTCTTCACTCAGAAAGTCCCGCCGTCCTTCCAAATCCACTCTCAAACGCCTCACTTCTCGTGTTGTTCTGCTCACTCGCCGCAAACAACTCCACCAGGTTTTTGAAGAGATTGAGCTAGCGAAACGGAAATATGGAGGGCTGAATACTATTGTGATGAACGCGGTGCTGGAGGCGTGTGTTCACTGTGGTGACATTGATTCTGCCCTTAGCTTGTTTGATGAGATGTCTAGCTCTAGGAGTTGCTGTGTTGATAATGTATCTTATGCCATTCTTTTGAAGGGTTTGGGTATGGCTCGAAGAGTTGATGAAGCATTTCAACTTCTTGAATCTGTGGATCGGGGCAATGCTGCTGGAAATCCAAAGTTATCCGTGCCACTTCTCCATGGTCTGCTTAATGCACTTATTGATGCAGGAGATTTACGCCGTGCTAATGGTCTTCTTGCACGCTATGGATTTGTGTTCCTTGAAGGTGGCAATCATTCCATCTTGATCTACAACTTGTTAATGAAGGGTTATATTACAACAGGGTCGCCAGAGGCTGCATTCACTGTTCATAATGAAATGCTACGACAAGGATTAAGGCCTGACAGACTTGCCTATAACACCCTAATCCTTGCTGCGGTGAAGACAAAGAAAAAGGATGCTGCAATGCAGTTCTTGGAGGAAATGAAGGATGCTGCATTGAAGCATGATTCTAATGATCTTCTCCCAGACAATGTTACATATACTACTTTATTGAAGGCTGCTGGACTTGCTAAAGATATTCATCTGGTTCAGAAGATAGTGATGGAAATGAAAATGTCTCAAGTGTTATCTATTGATCGCTTTGCTTATACTGCACTAGTTGATGCACGGCTTTGTTGTGGCTCAATCAATGGGACCATCACTCATGCAGTTCAGGAAGAAGCTGATCACCTCCTGATGCAAGCTGCTTTAAATGCTGGCCAGGTTGAAGTGGCTATCCAAATACTTTCAGACATTAATGCAAGATGGAAAGGAATATCTTGGACAAGTCCTGGAGGCCTGGCTGCTGTACGTTTAGAGGCTTTGCTGGGCTTATCAAAGTCCATATTTCATCCTTACTTTCTTCCCAAGGTATCAGTGGATGATCCTGTGGAGAGTATCATGGTTCCGTTTGAAGAAACCCGGCCTTTACAAGCTGCATTAGTACTGAAGAAGGTGATCATGAGGTTCTTCAAGGAATCAGTCGTGCCCATTGTAGACGACTGGGGCAACTGCGTGGGGCTTCTTCATCGTGAAGACTGCACTGAGTTAAATTCACCACTCTCAGCAATGATGAGGAGCCCGCCTCCTTTCGTAACAGCCTCTACATCAGCTGGTCGTGTTATAGATTTAATCTTGGAAAAGAATTACAAAATGGTTATTATTGTAAAATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45119.p1 GENE.S_Transcript_45119~~S_Transcript_45119.p1 ORF type:3prime_partial len:518 (+),score=105.84,PPR_2|PF13041.2|3.7e-10,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|0.00079,PPR_2|PF13041.2|1.8e+02,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|0.00074,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|31,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.098,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.026,PPR|PF01535.16|1.3,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|1.3e+03 S_Transcript_45119:219-1769(+)
MHHQLFNSSPYKLIPISTIFPISTLLSSHHHSLGYVYTYAVHYPSILSYHVSSLRKSRRPSKSTLKRLTSRVVLLTRRKQLHQVFEEIELAKRKYGGLNTIVMNAVLEACVHCGDIDSALSLFDEMSSSRSCCVDNVSYAILLKGLGMARRVDEAFQLLESVDRGNAAGNPKLSVPLLHGLLNALIDAGDLRRANGLLARYGFVFLEGGNHSILIYNLLMKGYITTGSPEAAFTVHNEMLRQGLRPDRLAYNTLILAAVKTKKKDAAMQFLEEMKDAALKHDSNDLLPDNVTYTTLLKAAGLAKDIHLVQKIVMEMKMSQVLSIDRFAYTALVDARLCCGSINGTITHAVQEEADHLLMQAALNAGQVEVAIQILSDINARWKGISWTSPGGLAAVRLEALLGLSKSIFHPYFLPKVSVDDPVESIMVPFEETRPLQAALVLKKVIMRFFKESVVPIVDDWGNCVGLLHREDCTELNSPLSAMMRSPPPFVTASTSAGRVIDLILEKNYKMVIIVKY

Click here to download the sequence:
Link to NCBI Protein BLAST