Transcript Information: S_Transcript_45121.p1


Annotated TAIR IDAT5G64200.1
Annotated Gene NameOrtholog of human splicing factor SC35
Annotated Gene Symbol(s)ATSC35, SC35, At-SC35
Annotation TypeOrtholog
Chromosome Positionchr5:25681849-25683553 | Reverse length=303
E-Value1.3E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.170181943549
Replicate 267.093930930502
Replicate 366.063532239763
Condition 2: 8 Hour
Replicate 187.450014770631
Replicate 288.318715898622
Replicate 376.991568961276
Condition 3: 24 Hour
Replicate 181.510759293262
Replicate 259.111956312936
Replicate 363.243335224769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45121.p1 GENE.S_Transcript_45121~~S_Transcript_45121.p1 ORF type:complete len:268 (+),score=37.43,RRM_1|PF00076.18|1.6e-20,RRM_6|PF14259.2|2.6e-12,RRM_5|PF13893.2|1.9e-07 S_Transcript_45121:139-942(+)
ATGTCGCACTTTGGAAGAGCAGGTCCTCCTGATATCGCTGACACCTACTCTCTTCTCGTTCTCAACATCACTTTCCGAACTACGCCAGATGATTTGTTTCCGTTGTTCGATAAGTACGGTAAAGTCGTCGACATCTTCATCCCTAGAGACCGAAGGACTGGCGAATCACGAGGGTTTGCATTTGTCCGGTACAAGTATGCTGATGAAGCTCAGAAGGCTGTCGATAGGCTTGATGGGAGAGTGGTGGATGGCAGGGAAATAGCGGTTCAGTTTGCAAAATATGGTCCTAATGCTGAGAGGATTCATAAAGGAAGGATTGTGGAGCCTATTTCTAGGGTCAAGAGCCCAAGACGGAGGCATCGAGATGATTACTACAGAGATAGGGACTATCACAGAAGAAGAAGTCGCAGTAGAAGCTGGGACAGATATGATCGTGTCAGATATCGTGAAAGGGATAGAGATTATCGCCATCGGAGCAGGAGCCGTAGTTACAGTCCTGATTACTATCGAGGTCGTGGAAGAGATCGTTATGATGATGAAAGGAGCCGTCGAAGCAGATCATATGAGAGTGCTTCTCCAAGACGTAGTCTTAGTAGAAGCTTATCACCTCGCAGGAGTGTTTCACCGCGTAGGAGCCCTTCACCTCATAGTCCATCTCGTTCAAGGAGTGGGAGTCCAGATAACCGCAGCCTGAATGGACGTTCTGTTAGTCCTCGCCGGTCTGCATCTCCCAAGGATGTTTCACCACATGACAGGGCAGTAGGTTTGCGTAGCCCCTCTCCTCGCAGATCAGATGATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45121.p1 GENE.S_Transcript_45121~~S_Transcript_45121.p1 ORF type:complete len:268 (+),score=37.43,RRM_1|PF00076.18|1.6e-20,RRM_6|PF14259.2|2.6e-12,RRM_5|PF13893.2|1.9e-07 S_Transcript_45121:139-942(+)
MSHFGRAGPPDIADTYSLLVLNITFRTTPDDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREIAVQFAKYGPNAERIHKGRIVEPISRVKSPRRRHRDDYYRDRDYHRRRSRSRSWDRYDRVRYRERDRDYRHRSRSRSYSPDYYRGRGRDRYDDERSRRSRSYESASPRRSLSRSLSPRRSVSPRRSPSPHSPSRSRSGSPDNRSLNGRSVSPRRSASPKDVSPHDRAVGLRSPSPRRSDDE*

Click here to download the sequence:
Link to NCBI Protein BLAST