Transcript Information: S_Transcript_451665.p1


Annotated TAIR IDAT1G49000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18123559-18124029 | Reverse length=156
E-Value9.9E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29902248578855
Replicate 20
Replicate 30.31083263062248
Condition 2: 8 Hour
Replicate 10.3594166907382
Replicate 20
Replicate 30.35925585851092
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.14169687868043


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_451665.p1 GENE.S_Transcript_451665~~S_Transcript_451665.p1 ORF type:complete len:178 (+),score=36.77 S_Transcript_451665:69-602(+)
ATGGTCCGACCATTTCCACACCATCTAATGGAGTCACAAAACTTCCAATCAATCTCCATAACCATAGGCCTTGTTTCCTCCATCTTCACCCTCGTGGCTCTGTGTGCCAAACACGGCCTTAAAACATCATCCAAGCGACACGACGAAGAGGATGATGAGTTATATGAGGTTAAGAGCAGTAGTTCTTCCTCATCAAAGAATAATAACTTCAACAAAACTCCGATGTTGAAGTCTCCGTTGGCTTCTCCTAGGAGGCTTTTAACCAGTATTAGTAATCTAGCTGGTAACAAGAAGAACAAGGAGGAAAGTGATCGTATGGTTGAAGATCCTAAGGACGTGTTTGGAGAAGGTGGGTTGTGGCAGAAGAATATTTTGATGGGGGAAAAATGTCAACCTCCTGAATTTTCAGGAGTAATTTATTATGATAATTATGGGAACAGGATTTCTGAGATGCCCAGGTCTCCTAGAGCTTCTGCTGTTGCTGGTTTGAATACCAGTTTCTCTTTTCCTGTTCCTAGCCACCATTCAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_451665.p1 GENE.S_Transcript_451665~~S_Transcript_451665.p1 ORF type:complete len:178 (+),score=36.77 S_Transcript_451665:69-602(+)
MVRPFPHHLMESQNFQSISITIGLVSSIFTLVALCAKHGLKTSSKRHDEEDDELYEVKSSSSSSSKNNNFNKTPMLKSPLASPRRLLTSISNLAGNKKNKEESDRMVEDPKDVFGEGGLWQKNILMGEKCQPPEFSGVIYYDNYGNRISEMPRSPRASAVAGLNTSFSFPVPSHHSS*

Click here to download the sequence:
Link to NCBI Protein BLAST