Transcript Information: S_Transcript_45192.p1


Annotated TAIR IDAT5G16660.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5465699-5467006 | Reverse length=168
E-Value2.1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1229.39427445048
Replicate 2216.97332307176
Replicate 3219.16306622046
Condition 2: 8 Hour
Replicate 1250.27896734157
Replicate 2273.26595485703
Replicate 3237.35130922111
Condition 3: 24 Hour
Replicate 1215.09839265278
Replicate 2202.16676093257
Replicate 3224.36787967741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45192.p1 GENE.S_Transcript_45192~~S_Transcript_45192.p1 ORF type:complete len:163 (+),score=39.60 S_Transcript_45192:174-662(+)
ATGGCGACATCACTTACCTTCTCTCACATTTCAGGTGGATCTAGCCTCAATCCATGTGAGCTCTCATTCTCAAAGTGCAGTTGTTTTGAGAAAATACCAAGTAATGCACTCATGATGAAGACAAACAGATTGGGAATGGACAGGAAATTTGCTGTTCGTGCAGATTACAGGAATGCTGAGAGAGGTGGAGGTGGTGGTGACTTTGTTGCCGGTTTTCTCCTTGGCGGTGCTATATGTGGAACTTTAGCATATATATTTGCACCTCAGATCAGAAGATCCCTGCTGAATGAAGATGAATATGGTTTTCGTAAGGCTAGGAGACCAATATACTATGATGACGAAGGCCTGGAGAAGACTAGGCAAACTCTCAATGCAAAGTTAAGTCAGCTAAATGCTGCAATTGACAATGTTTCTTCTCGCCTACGAGGTGGAAACAATGTGCCTCCAGTGTCTGTTGAATCTGATCCCGAAGTAGAAGCTACAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45192.p1 GENE.S_Transcript_45192~~S_Transcript_45192.p1 ORF type:complete len:163 (+),score=39.60 S_Transcript_45192:174-662(+)
MATSLTFSHISGGSSLNPCELSFSKCSCFEKIPSNALMMKTNRLGMDRKFAVRADYRNAERGGGGGDFVAGFLLGGAICGTLAYIFAPQIRRSLLNEDEYGFRKARRPIYYDDEGLEKTRQTLNAKLSQLNAAIDNVSSRLRGGNNVPPVSVESDPEVEATM*

Click here to download the sequence:
Link to NCBI Protein BLAST