Transcript Information: S_Transcript_45205.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value2.6E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6373244467296
Replicate 22.6833122434815
Replicate 31.9938093063352
Condition 2: 8 Hour
Replicate 11.1527238009261
Replicate 22.6201264172653
Replicate 32.8805199466191
Condition 3: 24 Hour
Replicate 13.5424135390153
Replicate 22.6543202747073
Replicate 33.976448442248


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45205.p1 GENE.S_Transcript_45205~~S_Transcript_45205.p1 ORF type:complete len:222 (+),score=8.76,MatE|PF01554.14|1.8e-14,MatE|PF01554.14|1.2e+03,MatE|PF01554.14|22 S_Transcript_45205:1051-1716(+)
ATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGAGTCCATACTACTTGCTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGCTTGGAACTTTGGTCCTTCGAGATGCTAGTTTTCTTGTCTGGTCTTCTGCCCAATCCACAATTAGAAACTTCAGTTCTATCTATCTGGTATGTGCTTGACCTTCTTTCATTCTGTTTCAATGGAAGGAACATGATTGAGAGCATGTATGCTCTTTTATTGTTTCAGCTATCATGTCTGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45205.p1 GENE.S_Transcript_45205~~S_Transcript_45205.p1 ORF type:complete len:222 (+),score=8.76,MatE|PF01554.14|1.8e-14,MatE|PF01554.14|1.2e+03,MatE|PF01554.14|22 S_Transcript_45205:1051-1716(+)
MVGINTQRAMVVLLLVSIPISIVWANTESILLALGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVCLELWSFEMLVFLSGLLPNPQLETSVLSIWYVLDLLSFCFNGRNMIESMYALLLFQLSCLI*

Click here to download the sequence:
Link to NCBI Protein BLAST