Transcript Information: S_Transcript_45206.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.2E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9009286596557
Replicate 21.5128769982296
Replicate 31.2119512283509
Condition 2: 8 Hour
Replicate 11.2185937324076
Replicate 21.2144717832994
Replicate 31.9488774953126
Condition 3: 24 Hour
Replicate 10
Replicate 21.0360599577759
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45206.p1 GENE.S_Transcript_45206~~S_Transcript_45206.p1 ORF type:complete len:350 (+),score=27.43,MatE|PF01554.14|4.6e-14,MatE|PF01554.14|2.8e+03,MatE|PF01554.14|4.5e-28 S_Transcript_45206:1054-2103(+)
ATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGAGTCCATACTACTTGCTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGCTTGGAACTTTGGTCCTTCGAGATGCTAGTTTTCTTGTCTGGTCTTCTGCCCAATCCACAATTAGAAACTTCAGTTCTATCTATCTGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGTAACAGCGCGGTCAGTCATTACACATTTTGTCTTACAGTCTTTTGGCCATTATGATGTTCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45206.p1 GENE.S_Transcript_45206~~S_Transcript_45206.p1 ORF type:complete len:350 (+),score=27.43,MatE|PF01554.14|4.6e-14,MatE|PF01554.14|2.8e+03,MatE|PF01554.14|4.5e-28 S_Transcript_45206:1054-2103(+)
MVGINTQRAMVVLLLVSIPISIVWANTESILLALGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVCLELWSFEMLVFLSGLLPNPQLETSVLSICVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKVTARSVITHFVLQSFGHYDVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST