Transcript Information: S_Transcript_45207.p2


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1060059048564
Replicate 22.0171693309728
Replicate 34.0047084067247
Condition 2: 8 Hour
Replicate 14.5087968099081
Replicate 24.218691457777
Replicate 32.0706823387696
Condition 3: 24 Hour
Replicate 15.7420836603847
Replicate 28.677002146373
Replicate 35.3326608170817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45207.p2 GENE.S_Transcript_45207~~S_Transcript_45207.p2 ORF type:complete len:175 (+),score=23.31,MatE|PF01554.14|5.3e-23 S_Transcript_45207:1888-2412(+)
ATGAAATTTCAGGTAACCAATTTTTCTGTGTTAATTTCTTCCAGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGTAACAGCGCGGTCAGTCATTACACATTTTGTCTTACAGTCTTTTGGCCATTATGATGTTCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45207.p2 GENE.S_Transcript_45207~~S_Transcript_45207.p2 ORF type:complete len:175 (+),score=23.31,MatE|PF01554.14|5.3e-23 S_Transcript_45207:1888-2412(+)
MKFQVTNFSVLISSSVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKVTARSVITHFVLQSFGHYDVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST