Transcript Information: S_Transcript_45209.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value5.9E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9786226800508
Replicate 25.5532191403269
Replicate 36.2730394842179
Condition 2: 8 Hour
Replicate 16.4556453681117
Replicate 26.0875778611501
Replicate 36.9602767689735
Condition 3: 24 Hour
Replicate 112.779999865246
Replicate 210.638115637877
Replicate 310.55207980214


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45209.p1 GENE.S_Transcript_45209~~S_Transcript_45209.p1 ORF type:complete len:294 (+),score=35.70,MatE|PF01554.14|6e-34,MatE|PF01554.14|1.3e+03 S_Transcript_45209:160-1041(+)
ATGGACAAACAAGATGCAATTGAAGGAGCATCATTAGTTTTGCCTCTAAGCACACCACTAATCCAAGACCAACAGCATCAGATTGAAGAATCAAATGGTGATGAAGTTGATGATTATCATGATGTAAAGCTCATTAACAAATGGGGAATTAATGATTTTGGGGAAGAAGCTAAGAAACAAGTATGGCTAGCAGGTCCATTAATATTAGTTGGGCTCTTAACATATTCATTGCATATAATATCTCTGATGTTTGTTGGTCATCTTGGGGAGTTGACTCTTTCTGGTGCTTCTATGGCCACTTCCTTTGCTTATGTCACTGGTTTCAGCTTCTTGTTAGGATTGGCAAGTGCATTGGAAACCATATGTGGCCAGTCATTTGGTGCAGAACAATACCATATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGAGTCCATACTACTTGCTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45209.p1 GENE.S_Transcript_45209~~S_Transcript_45209.p1 ORF type:complete len:294 (+),score=35.70,MatE|PF01554.14|6e-34,MatE|PF01554.14|1.3e+03 S_Transcript_45209:160-1041(+)
MDKQDAIEGASLVLPLSTPLIQDQQHQIEESNGDEVDDYHDVKLINKWGINDFGEEAKKQVWLAGPLILVGLLTYSLHIISLMFVGHLGELTLSGASMATSFAYVTGFSFLLGLASALETICGQSFGAEQYHMVGINTQRAMVVLLLVSIPISIVWANTESILLALGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVW*

Click here to download the sequence:
Link to NCBI Protein BLAST