Transcript Information: S_Transcript_45210.p2


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value1.1E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.198540123715
Replicate 217.693920338205
Replicate 316.251519915252
Condition 2: 8 Hour
Replicate 114.040974812766
Replicate 216.05900026119
Replicate 310.130303812268
Condition 3: 24 Hour
Replicate 121.736740503017
Replicate 220.868658184162
Replicate 316.481731987502


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45210.p2 GENE.S_Transcript_45210~~S_Transcript_45210.p2 ORF type:complete len:202 (+),score=33.77,MatE|PF01554.14|8.3e-23,MatE|PF01554.14|3.5e+02 S_Transcript_45210:1888-2493(+)
ATGAAATTTCAGGTAACCAATTTTTCTGTGTTAATTTCTTCCAGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGGTCTTTGGTTGGGAATCATATGTGCACTCATAATTCAGGTTCTATCCCTTCTTGCAGTTACTGTGAGAACAAATTGGGAGAAAGAAGCGAAGAAAGCGACAGAGAGAGTTTTTGAATCCAAGATTCCTAGAGATGCAGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45210.p2 GENE.S_Transcript_45210~~S_Transcript_45210.p2 ORF type:complete len:202 (+),score=33.77,MatE|PF01554.14|8.3e-23,MatE|PF01554.14|3.5e+02 S_Transcript_45210:1888-2493(+)
MKFQVTNFSVLISSSVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKGLWLGIICALIIQVLSLLAVTVRTNWEKEAKKATERVFESKIPRDAVF*

Click here to download the sequence:
Link to NCBI Protein BLAST