Transcript Information: S_Transcript_45213.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value8.9E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.99487379967573
Replicate 30.048919724359683
Condition 2: 8 Hour
Replicate 10.56566022061361
Replicate 20.7714430565423
Replicate 30.056540709827537
Condition 3: 24 Hour
Replicate 12.9551433899743
Replicate 20.66127832185629
Replicate 33.5458046511171


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45213.p1 GENE.S_Transcript_45213~~S_Transcript_45213.p1 ORF type:complete len:377 (+),score=37.89,MatE|PF01554.14|5.3e-14,MatE|PF01554.14|3.1e+03,MatE|PF01554.14|5.4e-28,MatE|PF01554.14|7.9e+02 S_Transcript_45213:1054-2184(+)
ATGGTAGGCATAAACACGCAAAGGGCCATGGTTGTGCTTTTGCTGGTAAGCATACCGATATCTATAGTCTGGGCAAACACCGAGTCCATACTACTTGCTCTAGGACAAGACGAGAGGATATCAAAAGAAGCCGGAAACTATATCCTCATGATGATGCCTAGTCTCTTTGCCTATAGCCTTCTTCAATGCTTTTTTCGATTCTTTCAAACCCAAAACGTCATCTTTCCAATGCTGCTCAGCTCTGGAATCACTACCTTATTGCACATATTCATATGTTGGACTTTGGTATTTAAATCTGGTCTCGGAAGCAGAGGAGCTGCCCTAGCCAACACTATTTCATACTGGATTAATCTAATCATATTGGTCCTTTATGTGAAATTTTCTTCCTTGTTCTCAAAGACTTGGACCGGCTTCTCAAATGCAGCGTTTCAAGGTATCCCATCATTTCTGAGGCTTGCTATTCCCTCGACTTTCATGGTCTGCTTGGAACTTTGGTCCTTCGAGATGCTAGTTTTCTTGTCTGGTCTTCTGCCCAATCCACAATTAGAAACTTCAGTTCTATCTATCTGTGTTAACACTACTTCAATTGTTTGGGTTATTCCTGAAGGTCTCAGTGGAGCTGTCAGCACTCGCATATCCAACGAGTTGGGAGCTAGGAATCCACGAGGGGCAAGCTTAGCAATACGGGTTGCATTATGCATGACAATCTTGGAGAGCATTCTTGTTGGCTTAGTCTTGTTACTCATACGAGATGTTTGGGGCTATGCTTACAGCAGTGAGATGGAAGTGGTCAGATTTTTAGCTGCTATGATGCCCTTATTAGCTGCAACCAATTTCCTGGATGGCCTAACATGTGTCCTCTCTGGTGCTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGCATCATTCTACGTCGTTGGCTTTCCTGTTGGTATTCTTTTAGCCTTCATCATGCACATTGGAGGAAAGGGTCTTTGGTTGGGAATCATATGTGCACTCATAATTCAGGTTCTATCCCTTCTTGCAGTTACTGTGAGAACAAATTGGGAGAAAGAAGCGAAGAAAGCGACAGAGAGAGTTTTTGAATCCAAGATTCCTAGAGATGCAGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45213.p1 GENE.S_Transcript_45213~~S_Transcript_45213.p1 ORF type:complete len:377 (+),score=37.89,MatE|PF01554.14|5.3e-14,MatE|PF01554.14|3.1e+03,MatE|PF01554.14|5.4e-28,MatE|PF01554.14|7.9e+02 S_Transcript_45213:1054-2184(+)
MVGINTQRAMVVLLLVSIPISIVWANTESILLALGQDERISKEAGNYILMMMPSLFAYSLLQCFFRFFQTQNVIFPMLLSSGITTLLHIFICWTLVFKSGLGSRGAALANTISYWINLIILVLYVKFSSLFSKTWTGFSNAAFQGIPSFLRLAIPSTFMVCLELWSFEMLVFLSGLLPNPQLETSVLSICVNTTSIVWVIPEGLSGAVSTRISNELGARNPRGASLAIRVALCMTILESILVGLVLLLIRDVWGYAYSSEMEVVRFLAAMMPLLAATNFLDGLTCVLSGAARGCGWQKLGAYINLASFYVVGFPVGILLAFIMHIGGKGLWLGIICALIIQVLSLLAVTVRTNWEKEAKKATERVFESKIPRDAVF*

Click here to download the sequence:
Link to NCBI Protein BLAST