Transcript Information: S_Transcript_452250.p1


Annotated TAIR IDAT2G27610.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11783927-11786533 | Reverse length=868
E-Value7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13440909714738
Replicate 20.22285646017692
Replicate 30.093145131735356
Condition 2: 8 Hour
Replicate 10.64622394900403
Replicate 20.11298913454407
Replicate 30.75359057189328
Condition 3: 24 Hour
Replicate 10
Replicate 20.11446369483004
Replicate 30.2547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_452250.p1 GENE.S_Transcript_452250~~S_Transcript_452250.p1 ORF type:3prime_partial len:198 (+),score=36.05,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|2.9,PPR|PF01535.16|1.8e-07,PPR_2|PF13041.2|0.95,PPR_2|PF13041.2|18,PPR_2|PF13041.2|1.4e-06,PPR_3|PF13812.2|17,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.0018,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|4.5e-05 S_Transcript_452250:429-1019(+)
ATGCCTATCTTCAAGCCCCCTTTTAGCAGGCTTGCAAAAGCCAATGCCGTGCAAGTTATCAAATTTTTCAACGACCCACAAATTTTGCCCGGAACCCAGATTTTCTTTCAGTATCATGCTGTTGCTCTTGATCCAGAAACGTCCTATGAGCATTCCGGGGCTCAAAGCATGTCCTTTGCACACAATGTGTTCGATGAAATTCCTCAGTATAGTCATTTGCTTTTTGAATACTCCCGCAGTAATCGGAACGTGGATGCTGTGAATGTGTTCTTTGATATGCATAGATTGGGTCTGATTGCTGATGGGTCGAGCCTGTCTTGTGCATTGAAGGTGTCTAGTTGTTTAAACAGTCAGATTGTAGGGAAAATATTGCATTGTTATTGTGTAAAGTCTGGTTTTGCTGTGGATGTTAGTGTGGGAACTTCTCTAGTTGATATGTATATGAAAACTGATACTCTGAATGATGGAAGAAGAGCTTTTGATGAAATGGAGGTGAAAAATGTAGTTTCCTGGACCTCTTTGCTCTCTGGATATGCTCAACATGGATTGGTTGAGCAGGTATTAGAGCTATTCACCCGCATGAAAATGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_452250.p1 GENE.S_Transcript_452250~~S_Transcript_452250.p1 ORF type:3prime_partial len:198 (+),score=36.05,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|2.9,PPR|PF01535.16|1.8e-07,PPR_2|PF13041.2|0.95,PPR_2|PF13041.2|18,PPR_2|PF13041.2|1.4e-06,PPR_3|PF13812.2|17,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.0018,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|4.5e-05 S_Transcript_452250:429-1019(+)
MPIFKPPFSRLAKANAVQVIKFFNDPQILPGTQIFFQYHAVALDPETSYEHSGAQSMSFAHNVFDEIPQYSHLLFEYSRSNRNVDAVNVFFDMHRLGLIADGSSLSCALKVSSCLNSQIVGKILHCYCVKSGFAVDVSVGTSLVDMYMKTDTLNDGRRAFDEMEVKNVVSWTSLLSGYAQHGLVEQVLELFTRMKME

Click here to download the sequence:
Link to NCBI Protein BLAST