Transcript Information: S_Transcript_45234.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value1.2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33266251543976
Replicate 20.68946217367234
Replicate 31.613739407315
Condition 2: 8 Hour
Replicate 11.1995532053387
Replicate 21.6778886479795
Replicate 30.93256833271793
Condition 3: 24 Hour
Replicate 10.81918313089728
Replicate 21.2748394011695
Replicate 30.15763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45234.p1 GENE.S_Transcript_45234~~S_Transcript_45234.p1 ORF type:complete len:160 (+),score=27.16,Pep_deformylase|PF01327.17|4.9e-06 S_Transcript_45234:43-522(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATATCCTTTAACTACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAGATTGTGAACAATACTTGTTGGCTTCCTTTTCCACAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45234.p1 GENE.S_Transcript_45234~~S_Transcript_45234.p1 ORF type:complete len:160 (+),score=27.16,Pep_deformylase|PF01327.17|4.9e-06 S_Transcript_45234:43-522(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSYPLTTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKIVNNTCWLPFPQN*

Click here to download the sequence:
Link to NCBI Protein BLAST