Transcript Information: S_Transcript_45235.p2


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value6.5E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65441806316018
Replicate 21.4467402988534
Replicate 32.7210594221706
Condition 2: 8 Hour
Replicate 10.6991931251519
Replicate 22.0171338937458
Replicate 31.921920685695
Condition 3: 24 Hour
Replicate 11.6115077984865
Replicate 21.3003826314298
Replicate 31.6539045511552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45235.p2 GENE.S_Transcript_45235~~S_Transcript_45235.p2 ORF type:complete len:122 (+),score=25.02,Pep_deformylase|PF01327.17|2.1e-29 S_Transcript_45235:569-934(+)
ATGGTCTTTAATCCTGTTGGTGAACCTGAAGAGGGGAATGAAATTGTTCTTATAAATCCCAGAGTTAGCAGGTCCTCACAAAAGATGAAAGTTTTCGAAGAAGGGTGTTTGTCATTTCCTAAAATATATGGTGATGTTCAGAGACCAGAATCCATTAAGATTGATGCCAATGATCTCACGGGTAAAAGGTTCTCAGTTACGTTGTCAGGCCTTCCTGCACGGGTGTTCCAGCATGAATTTGACCATTTGCAGGGCGTCCTTTTCTTTGAGAGAATGACAGATGAAGTTCTTGACAGTATCCGTGCAGATTTACAGGTAATGAAAGATGTTTCTGTACTTCAAAATTTTTGCACGTCCATTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45235.p2 GENE.S_Transcript_45235~~S_Transcript_45235.p2 ORF type:complete len:122 (+),score=25.02,Pep_deformylase|PF01327.17|2.1e-29 S_Transcript_45235:569-934(+)
MVFNPVGEPEEGNEIVLINPRVSRSSQKMKVFEEGCLSFPKIYGDVQRPESIKIDANDLTGKRFSVTLSGLPARVFQHEFDHLQGVLFFERMTDEVLDSIRADLQVMKDVSVLQNFCTSIE*

Click here to download the sequence:
Link to NCBI Protein BLAST