Transcript Information: S_Transcript_45236.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value2.4E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.163273151793
Replicate 232.130276054633
Replicate 330.737893472668
Condition 2: 8 Hour
Replicate 141.270496471345
Replicate 241.340859460466
Replicate 337.871845744773
Condition 3: 24 Hour
Replicate 129.974856310718
Replicate 234.619155547042
Replicate 330.282778233974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45236.p1 GENE.S_Transcript_45236~~S_Transcript_45236.p1 ORF type:complete len:309 (+),score=66.88,Pep_deformylase|PF01327.17|3.3e-50 S_Transcript_45236:43-969(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATTTCCTTTAAATACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAAACTGATGGAATTGGGCTTGCAGCTCCCCAAGTAGGCATTAATGTCCAGCTCATGGTCTTTAATCCTGTTGGTGAACCTGAAGAGGGGAATGAAATTGTTCTTATAAATCCCAGAGTTAGCAGGTCCTCACAAAAGATGAAAGTTTTCGAAGAAGGGTGTTTGTCATTTCCTAAAATATATGGTGATGTTCAGAGACCAGAATCCATTAAGATTGATGCCAATGATCTCACGGGTAAAAGGTTCTCAGTTACGTTGTCAGGCCTTCCTGCACGGGTGTTCCAGCATGAATTTGACCATTTGCAGGGCGTCCTTTTCTTTGAGAGAATGACAGATGAAGTTCTTGACAGTATCCGTGCAGATTTACAGGCATTAGAGGATAAGTATGAGAAGGTTACAGGACTCCCGAGCCCTGAAAACATAAAAAATCAGATGGGAAGGAAAACACCTGTTGGATTTGGGAAATCACCAGTTGGTTTTGGGAAGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45236.p1 GENE.S_Transcript_45236~~S_Transcript_45236.p1 ORF type:complete len:309 (+),score=66.88,Pep_deformylase|PF01327.17|3.3e-50 S_Transcript_45236:43-969(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSFPLNTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKTDGIGLAAPQVGINVQLMVFNPVGEPEEGNEIVLINPRVSRSSQKMKVFEEGCLSFPKIYGDVQRPESIKIDANDLTGKRFSVTLSGLPARVFQHEFDHLQGVLFFERMTDEVLDSIRADLQALEDKYEKVTGLPSPENIKNQMGRKTPVGFGKSPVGFGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST