Transcript Information: S_Transcript_45239.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value3.4E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8944848336908
Replicate 22.0940952800353
Replicate 32.4381922280014
Condition 2: 8 Hour
Replicate 12.6747099719794
Replicate 22.6542871267472
Replicate 32.8902844210144
Condition 3: 24 Hour
Replicate 13.1101190054405
Replicate 20.84509127911804
Replicate 32.9069474907591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45239.p1 GENE.S_Transcript_45239~~S_Transcript_45239.p1 ORF type:complete len:295 (+),score=53.01,Pep_deformylase|PF01327.17|6.7e-46 S_Transcript_45239:43-927(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATATCCTTTAACTACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAAACTGATGGAATTGGGCTTGCAGCTCCCCAAGTAGGCATTAATGTCCAGCTCATGGTCTTTAATCCTGTTGGTGAACCTGAAGAGGGGAATGAAATTGTTCTTATAAATCCCAGAGTTAGCAGGTCCTCACAAAAGATGAAAGTTTTCGAAGAAGGGTGTTTGTCATTTCCTAAAATATATGGTGATGTTCAGAGACCAGAATCCATTAAGATTGATGCCAATGATCTCACGGGTAAAAGGTTCTCAGTTACGTTGTCAGGCCTTCCTGCACGGGTGTTCCAGCATGAATTTGACCATTTACAGAGCAGATCTTATGAGTTCCTTCAGAACCTTCTTTCTCCTGTCATGCAAATTTATTGCAGTAATGCTCATACATTCATTCCTGCTATAAATCCTCTCAAGCTATCAGATGGTCCTGGTTTTATATGGTCCACTATATTTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45239.p1 GENE.S_Transcript_45239~~S_Transcript_45239.p1 ORF type:complete len:295 (+),score=53.01,Pep_deformylase|PF01327.17|6.7e-46 S_Transcript_45239:43-927(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSYPLTTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKTDGIGLAAPQVGINVQLMVFNPVGEPEEGNEIVLINPRVSRSSQKMKVFEEGCLSFPKIYGDVQRPESIKIDANDLTGKRFSVTLSGLPARVFQHEFDHLQSRSYEFLQNLLSPVMQIYCSNAHTFIPAINPLKLSDGPGFIWSTIFV*

Click here to download the sequence:
Link to NCBI Protein BLAST