Transcript Information: S_Transcript_45242.p1


Annotated TAIR IDAT5G28300.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10292789-10295101 | Reverse length=619
E-Value4E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4396542842734
Replicate 29.7113988223249
Replicate 311.507006274383
Condition 2: 8 Hour
Replicate 18.3843414922061
Replicate 27.9353138337492
Replicate 39.6558967783249
Condition 3: 24 Hour
Replicate 19.6154829039795
Replicate 29.1042661887891
Replicate 310.239718882419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45242.p1 GENE.S_Transcript_45242~~S_Transcript_45242.p1 ORF type:3prime_partial len:234 (+),score=55.48,Myb_DNA-bind_4|PF13837.2|8.5e-11 S_Transcript_45242:339-1037(+)
ATGTTTGATGGAATGCCTGACCAGTTCTACCAATTTTTAGCAGCAGCTTCAAGAGCCAATACTACTACTAGTACTAGTACCACCACTACTTCACTTCCACTCCCACTTTCTTTCTCTCTTCACCATCATCACCATCACCACCATCCCAGTTCTAATTTCCCAACAAGTTGCTTTGATGTTGATGTTCATCAACAAGCTAGCTTACTTTCACCACCACCTCATCTTCTCCTTCATCATAACCCACAATTGCCATTGCACCATAATCATAAGCACCATAAACAAGAGACATCTGTTGATGATGTTAATGTTGTTCGACCCGAGCTCGAGCTGATTGATCATGACCATGATCCTTGGTCTAATGATGAAGTTCTTGCCCTTCTCAGGATCAGATCTAGTATGGACAACAACACTTGGTTCCCTGACTTCACTACTTGGGATAACGTCTCCAGAAAGCTAGCAGAAGTTGGGTTCAAAAGGAGTGCTGAGAAGTGCAAAGAGAAATTTGAGGAGGAAAGCAGAAGCTTCAACAGCAGCTTTATTAGTAATACTACTAACAACAACAAGAATAATAATAATGTTAGTAATATTACTAACAACAACTACAGGCTCTTTGGTGAGCTTGAAGAGGTTTATACTGATCATCATCAACAAAGCCCTCCTCATTCTCCTCCTCCTCAACCTGAACATGAACCCGTACCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45242.p1 GENE.S_Transcript_45242~~S_Transcript_45242.p1 ORF type:3prime_partial len:234 (+),score=55.48,Myb_DNA-bind_4|PF13837.2|8.5e-11 S_Transcript_45242:339-1037(+)
MFDGMPDQFYQFLAAASRANTTTSTSTTTTSLPLPLSFSLHHHHHHHHPSSNFPTSCFDVDVHQQASLLSPPPHLLLHHNPQLPLHHNHKHHKQETSVDDVNVVRPELELIDHDHDPWSNDEVLALLRIRSSMDNNTWFPDFTTWDNVSRKLAEVGFKRSAEKCKEKFEEESRSFNSSFISNTTNNNKNNNNVSNITNNNYRLFGELEEVYTDHHQQSPPHSPPPQPEHEPVP

Click here to download the sequence:
Link to NCBI Protein BLAST