Transcript Information: S_Transcript_45251.p1


Annotated TAIR IDAT5G64090.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25648069-25649415 | Forward length=448
E-Value2.3E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.007940878623
Replicate 215.354189734887
Replicate 314.809477583191
Condition 2: 8 Hour
Replicate 117.215572054731
Replicate 217.245964690153
Replicate 318.303329528046
Condition 3: 24 Hour
Replicate 117.26073235124
Replicate 214.122417920165
Replicate 314.312295005045


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45251.p1 GENE.S_Transcript_45251~~S_Transcript_45251.p1 ORF type:5prime_partial len:467 (+),score=93.36,Hyccin|PF09790.5|2.5e-65 S_Transcript_45251:1-1401(+)
CCCAATAACAACAACAATTACTCTTCCTCGATTATGACCCACCGAAACCATAATCATTACCATAATAATAATAATAATAATGTTAATGGTGGTGGTGGTAATAATAATAGTGAAGATCCAATGCAGTCTTGGTGGGAATCTGTGTCCAAGGCTCGTTCCCGAATCCATTGTTTACTTTCCCTCCTTTCCCCTGATTCTTCTCATAGGCATAGTTCTGATGTTAATGGGGATGGATACGGAGACGATAGTTTGTTTTTGATGTCTCTTGCAGACTCTGATAGGCCTGCTCGCTCTCTTCTTGAGTCGTTTGATGCTTACAGTGCGATTGCTGCTTCACTGTCCTCGCCTTCATCTGGGTCTGGTGATGACAGTTTGTGTCAGTGGCTTTATGATACCTTTCAGTCCTCCGATTCTGATCTCCGTTTGGTTGTTATCTCTTTCGTTCCTCTTTTGGCGGGACTTTACCTCTCTCGAGTCCACACTTCTTCTACTATTGAAATCGATGCTTCTACTCCTTCTCTTGCGGGTTTCGAAGCTGTACTCCTAGCTCTTTATGCTTCTGAAACTAGAGCGCGTTCTGGCAAGCCTGTTGTCATCAATATTCCTGATCTCTCGCAGCCGTCTCTCTATCATAACCCGAACCCTAGCTTTGCTAATGGCGGCACCACCCACCGGTCTGTTACTACTAAATCCACCAGTTTCAGTGCAACGACTAAAGTCAATCAATCACCTTTGGTTGGAGTCGTATCTGCTCCTCTAGAGCCTCAGCTTGCTATAAAATCCACCAAACGAGGTTGCATTGTCGGTGTTGCCCTTGATTCATACTATAAGCGCATCGCGCTTATGCCCTCTTGGTCCAAGATAGAGCTTTGCCGTTTTGCTGCTGCCTGGGCTGGAGCTGATTGCATTTGCGCTAATTCCTTGGACCATCACCATTCTACTGGACACGATTATTATAATAATGAGTACAATGACAATGATGATGCTCTGTCCTGTTCTCTGGTCACCAATGGTGTGCTTCCCCTCGAAGACGATGTTGGTGATGATATGGCCAGGTTGCAAATTCAGGAAAATCACATTGATTCTGATGCTAGAGGAGCTCGAATTCCCCTTCCTTGGGAGCTTTTACAGCCAGTGTTGAGGATTCTAGGGCATTGTCTATTGGGACCTCTTACTGCTCAGGATATCAAAGATGCAGCCGGTGTAGCTGTTAGGCGTCTGTATGCAAGAGCTTCTCATGATCTGTTTCCGCAGGCAATCCTGGCTACAAGAAGTCTCATTCAACTTGACAATAGAGCACGTGCTGCTGCAGAAGCTGCTGCTATTGCCAATGCTTCTTCAGCTGCCAACACACCAAGCAGCAAAACAAAGAAACCTGAGGTCCTCTTAGTTTCTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45251.p1 GENE.S_Transcript_45251~~S_Transcript_45251.p1 ORF type:5prime_partial len:467 (+),score=93.36,Hyccin|PF09790.5|2.5e-65 S_Transcript_45251:1-1401(+)
PNNNNNYSSSIMTHRNHNHYHNNNNNNVNGGGGNNNSEDPMQSWWESVSKARSRIHCLLSLLSPDSSHRHSSDVNGDGYGDDSLFLMSLADSDRPARSLLESFDAYSAIAASLSSPSSGSGDDSLCQWLYDTFQSSDSDLRLVVISFVPLLAGLYLSRVHTSSTIEIDASTPSLAGFEAVLLALYASETRARSGKPVVINIPDLSQPSLYHNPNPSFANGGTTHRSVTTKSTSFSATTKVNQSPLVGVVSAPLEPQLAIKSTKRGCIVGVALDSYYKRIALMPSWSKIELCRFAAAWAGADCICANSLDHHHSTGHDYYNNEYNDNDDALSCSLVTNGVLPLEDDVGDDMARLQIQENHIDSDARGARIPLPWELLQPVLRILGHCLLGPLTAQDIKDAAGVAVRRLYARASHDLFPQAILATRSLIQLDNRARAAAEAAAIANASSAANTPSSKTKKPEVLLVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST