Transcript Information: S_Transcript_452538.p2


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4529872550669
Replicate 20.37553684353217
Replicate 30.54935809610725
Condition 2: 8 Hour
Replicate 10.45373170887517
Replicate 20.33319774569806
Replicate 30.86170447764818
Condition 3: 24 Hour
Replicate 10.46478475511903
Replicate 20.62687138402663
Replicate 30.53663924266204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_452538.p2 GENE.S_Transcript_452538~~S_Transcript_452538.p2 ORF type:complete len:470 (+),score=42.90,RVT_3|PF13456.2|1.6e+02,RVT_3|PF13456.2|1.6e-18,zf-RVT|PF13966.2|7.5e-18,zf-RVT|PF13966.2|2.7e+03 S_Transcript_452538:3157-4566(+)
ATGTTCCAAGCACATCAAAGAAGCTCTAATACATGGAAAGGCATGGTGGACTCCTCTATCTTTGTAAAGGAGGGAGCGAAGAGGGTTGTTGGCGATGGAAAAAGCACCTTCTTTTGGCTTCACAACTGGGTGACTAATAAGCCTCTTGAGCAGCTAGCCTTACAGCCATTAGACGAAGAAACACAATTCCAGACTGTTGATGAGTATTGGGATGGCGAACGTTGGAAGTGGGATCTTTTCTCCCATCTACTACCAACGGAAACACTCCAAGCAATAGCATCGATTTCTCTAGTTCATGGAGCTCCTGCTGCAGATAGACTCTCATGGGGACCCACGGTGTCAGGGCAATTTTCTATCAGCACCGCCCTTGACATTATACGGGGCCTGAATTCTGGAGAGCCTCAAGCTCGATGGAAAGCGATATGGAGTGTGACAGCATCACAAAGAGTTCGAACCTTTCTATGGCTCGCCATGCATGATAGCTTCTTGAGTAATGCTAACAGAGTAAGGAGACATCTAGTTGAAGATGCAGCCTGCGCGACATGTGGTCACGTTGAAGAAACTAGTCTCCATATCCTACGAGACTGCCCTGTGGCTAAAGAGGTATGGGATCCCATAATCCCCAATCATCAGGTAACCTTATTCTATACTGAATCACTGTCAAACTGGTTGGTGCGCAATATTGAATCTAATGATGAATGGGCTACTATTTTTGCCACCACACTATGGTGGATATGGCGATGGAGAAATACTCGAGTAATGGGAGACTCAAGCAAAATCCCTCCTCAGCGGCATGTGTTTGCTACCCAAAGGGGTATAGAGTACCTTGAAACAGAGTCTAAAAGGGCCAGCAAACTGTGTGGAAGCAACAAAACCACTCATGAGATCACAATTGCTTGGTCAAAACCACCGGTTGGATGGGTGAAACTTAACACTGATGGTGCTGCCAGAGGAAACCCAGGGCTCGCAGGGTGTGGTGGAATTCTTCGTTCCTCACTTGGAGCCTTTATGAAAGCCTTTGCATTCAAATTAGGACGCACTACGGCGCTACATGCAGAACTCACGGCAATTTTCCATGGACTTCAAATGGCTCGACGGCTACAAGTACCACAGTTGATCCTTGAAGTTGACTCCGAGGTGGCCCTTAACATGCTTAAAACCGAGATCCCGTCTTATTGCCCCTATTACTACCTGTTGCGCAATTGCAAAGATCTACTTCATAGCCCTGATTGGAAGGTCAAAATCAACCATGTTTATCGCGAAGCAAATAGGGCTGCTGATTGGTTCGCAAATTGGAGCTTTACGATGGAACACCCTCTTACTGAGTTTGATTTCCCTCCCCCTAGTGTAATGGCAGTGCTATTCCAAGACCTCATCGGTCGTGGACAGACTAGAGTTATTGTTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_452538.p2 GENE.S_Transcript_452538~~S_Transcript_452538.p2 ORF type:complete len:470 (+),score=42.90,RVT_3|PF13456.2|1.6e+02,RVT_3|PF13456.2|1.6e-18,zf-RVT|PF13966.2|7.5e-18,zf-RVT|PF13966.2|2.7e+03 S_Transcript_452538:3157-4566(+)
MFQAHQRSSNTWKGMVDSSIFVKEGAKRVVGDGKSTFFWLHNWVTNKPLEQLALQPLDEETQFQTVDEYWDGERWKWDLFSHLLPTETLQAIASISLVHGAPAADRLSWGPTVSGQFSISTALDIIRGLNSGEPQARWKAIWSVTASQRVRTFLWLAMHDSFLSNANRVRRHLVEDAACATCGHVEETSLHILRDCPVAKEVWDPIIPNHQVTLFYTESLSNWLVRNIESNDEWATIFATTLWWIWRWRNTRVMGDSSKIPPQRHVFATQRGIEYLETESKRASKLCGSNKTTHEITIAWSKPPVGWVKLNTDGAARGNPGLAGCGGILRSSLGAFMKAFAFKLGRTTALHAELTAIFHGLQMARRLQVPQLILEVDSEVALNMLKTEIPSYCPYYYLLRNCKDLLHSPDWKVKINHVYREANRAADWFANWSFTMEHPLTEFDFPPPSVMAVLFQDLIGRGQTRVIVL*

Click here to download the sequence:
Link to NCBI Protein BLAST