Transcript Information: S_Transcript_453135.p1


Annotated TAIR IDAT5G57120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23122767-23124400 | Reverse length=330
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7409270919068
Replicate 26.0171244247768
Replicate 36.9768708351451
Condition 2: 8 Hour
Replicate 19.1930568229283
Replicate 27.6103649331621
Replicate 37.2511387747151
Condition 3: 24 Hour
Replicate 16.470185432698
Replicate 26.313965101915
Replicate 36.5828796247957


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_453135.p1 GENE.S_Transcript_453135~~S_Transcript_453135.p1 ORF type:3prime_partial len:341 (-),score=110.04 S_Transcript_453135:3-929(-)
ATGAAGAAACAAATTGAGAACAACAACAAAACACCCCTTTCTTTAACCCCTGAGAATAAGTTACTTCTTCACCAGTCCATTTGTGGGTACCTCCAACTCAATGGCTTCCTCAAAACCCTCAAGCAGTTCACTCGTGAGGCCGATATTGAGAAAGACAGCTGGAAATGTTGTCTACTGAACTTGGAAGAAATGTGTCAAGAGCATCTACAGAAGCGCAACGATACCAATGATAAAAAGCAAGATAACAAGCAGGCAGATAAAGTTGAAAATCATGTTGAATCTGTGGAAAATGTAACAAAAGAAAATGGAGCTGTTGATGGGAAGAAGTCCAAGGCAATATTAGAAAATGACTCTGTTAATGGTGACAATGCAAAATCCAAGAAGAAAAAGAAAAGTAAAAATGCTAACGATACATTTAATGATGTTAATGGAGAAACTCACTTGAAAGATTTGGAACAGACGATGCAGGATTCGAGTGTGCCTACTGAACCTGAGAAGAAATCCAAGAACAAGAAGAAGAAACGAAAGCATGAATCAGAGCATTTGGACAAGGATTTACAGGAAAAACAGGCTGAAGTAGCAGCAGGAGAAACAACTTCAGACAAAACTGATAAAATGTCTCAAGATAAGAAAATAAAGGAGGATACTCCTATTCCTAAAGATGAGGTTGATAAGGAGAAGAAAAGTTCTAAAAAAAGAAAGAAGCGCTCATCTGGTGACAATGAAATTGACAATGTTGATGCAACACCATTAGATGGTTCCAAACGCAGGAAGACAGATGATCCATATCAGTCAAGTGGCACTGAGCAAGCCACACAAAGACCTACAGGAATGACCAATGGAGTCGTGGGAGAAGATGGAGGTGCAAAATCTAAAAAGCAGGAGAAAACAAAGGAACACAATGGTTCAGCTGAGCCAAGGACAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_453135.p1 GENE.S_Transcript_453135~~S_Transcript_453135.p1 ORF type:3prime_partial len:341 (-),score=110.04 S_Transcript_453135:3-929(-)
MKKQIENNNKTPLSLTPENKLLLHQSICGYLQLNGFLKTLKQFTREADIEKDSWKCCLLNLEEMCQEHLQKRNDTNDKKQDNKQADKVENHVESVENVTKENGAVDGKKSKAILENDSVNGDNAKSKKKKKSKNANDTFNDVNGETHLKDLEQTMQDSSVPTEPEKKSKNKKKKRKHESEHLDKDLQEKQAEVAAGETTSDKTDKMSQDKKIKEDTPIPKDEVDKEKKSSKKRKKRSSGDNEIDNVDATPLDGSKRRKTDDPYQSSGTEQATQRPTGMTNGVVGEDGGAKSKKQEKTKEHNGSAEPRTT

Click here to download the sequence:
Link to NCBI Protein BLAST