Transcript Information: S_Transcript_45360.p1


Annotated TAIR IDAT4G39470.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18359735-18361165 | Reverse length=341
E-Value8.3E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.923568606091
Replicate 217.662454798121
Replicate 320.639516281924
Condition 2: 8 Hour
Replicate 121.030024800275
Replicate 220.326776603408
Replicate 320.016820881132
Condition 3: 24 Hour
Replicate 118.940300644199
Replicate 214.439547541717
Replicate 317.047586800134


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45360.p1 GENE.S_Transcript_45360~~S_Transcript_45360.p1 ORF type:5prime_partial len:361 (-),score=84.50,TPR_2|PF07719.13|2.7,TPR_2|PF07719.13|0.54,TPR_2|PF07719.13|0.0042,TPR_2|PF07719.13|14,TPR_16|PF13432.2|0.00047,TPR_16|PF13432.2|0.71,TPR_16|PF13432.2|0.082,TPR_16|PF13432.2|0.071,TPR_16|PF13432.2|7.7e+02,TPR_11|PF13414.2|0.00024,TPR_11|PF13414.2|0.0042,TPR_19|PF14559.2|2.9e-07,TPR_19|PF14559.2|2.6,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|0.0083,TPR_14|PF13428.2|2.8,TPR_14|PF13428.2|1.4,TPR_14|PF13428.2|6.3e+02,TPR_6|PF13174.2|74,TPR_6|PF13174.2|0.0029,TPR_6|PF13174.2|0.2,TPR_6|PF13174.2|3.4e+03,TPR_1|PF00515.24|36,TPR_1|PF00515.24|1.9,TPR_1|PF00515.24|0.76,TPR_1|PF00515.24|43,TPR_12|PF13424.2|0.067,TPR_12|PF13424.2|0.77,TPR_12|PF13424.2|0.11,TPR_9|PF13371.2|0.00014,TPR_9|PF13371.2|8.6,PknG_TPR|PF16918.1|4.1,PknG_TPR|PF16918.1|0.00046,TPR_8|PF13181.2|7.9,TPR_8|PF13181.2|15,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|1.4e+03 S_Transcript_45360:378-1460(-)
GATCTCTTTAATGGGCATCACTCTCCCCTAATTGAAGTTCAGGTAATGGCTTTCTTATCACCCACTACTCTCTCTCTCCATTCATATACCCAACTAAACTTTCTCAAATTCTCAAAGCATAATAACAACAATGTACCCATCAACAGAAAACCACATTTCACAACTTCATTTCCCACAATTCACCCAATAACTGCATGTATCCCTACAAAGAACACTCAAACATCAAATTTGCTCCCTACCCACCAAAAAATTTCCAAACATTTGGTCCAAAATGGTGTAAAATTGCTTGTAGGGTCAATGATTTTGGTGGGTTCTCTTAGCGTTAGGCCAGTATTGGCTTCACCAGTTCAAAAAGGTGTGACATTGGAGGAAAAGAGAGATACCCAGAATGAGAAAGTTGTTGAAGATGAAGAAATGTGTGTGAAGTTACTGGAAACTGAGCCCAGAAATGTTGAGGCTTTGAAGGTGGTGGTGAATGGGAAGATGAGAAGGGGAAAGACAAAGGAAGCTGTGAAATATGTTGAGAGATTGATTGATATTGAACCTGATCAAGTTGAATGGAGGCTCTTGCAAGCCCTTTGTTATGATGTGATGGGGCAGTTGAGTAAAGCTAAGAGATTATTTAAGGATGTTCTCAAGGAGAGGCCTCTTTTGCTTAGAGCTTTGCATGGTTTGGCAATGGTGATGCACAAGAACCATGAAGGCCTTGCAGTTTTTGATATGTTGAACAGCGCTCTTGAACTTGCTTATCGTGAAAAACGAGTGACAGAGGAGAGAAACATTAAGATTTTGATTGCACAAATGCATCTGGTGAAGGGGGATCTGGATGAAGCTTTGAAACAATATCAAGAACTGGTTAATGAGAACCCGCGAGATTTTCGTCCGTACTTGTGCCAGGGAATAATTTACAGCTTACAGGATAAGAAAAGGGAAGCAGAAGAACAGTTCGAGATATATAGAAGCCTTGTTCCAGAAGAATTTCCACAAAGAGGATTCCTTGAAGACGTTGTATTGGCTGCTAAAACAGAATCGAGAGAACAGCTGGAGAAGGAGTTTAAGGCTGAATTTTCATACAAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45360.p1 GENE.S_Transcript_45360~~S_Transcript_45360.p1 ORF type:5prime_partial len:361 (-),score=84.50,TPR_2|PF07719.13|2.7,TPR_2|PF07719.13|0.54,TPR_2|PF07719.13|0.0042,TPR_2|PF07719.13|14,TPR_16|PF13432.2|0.00047,TPR_16|PF13432.2|0.71,TPR_16|PF13432.2|0.082,TPR_16|PF13432.2|0.071,TPR_16|PF13432.2|7.7e+02,TPR_11|PF13414.2|0.00024,TPR_11|PF13414.2|0.0042,TPR_19|PF14559.2|2.9e-07,TPR_19|PF14559.2|2.6,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|0.0083,TPR_14|PF13428.2|2.8,TPR_14|PF13428.2|1.4,TPR_14|PF13428.2|6.3e+02,TPR_6|PF13174.2|74,TPR_6|PF13174.2|0.0029,TPR_6|PF13174.2|0.2,TPR_6|PF13174.2|3.4e+03,TPR_1|PF00515.24|36,TPR_1|PF00515.24|1.9,TPR_1|PF00515.24|0.76,TPR_1|PF00515.24|43,TPR_12|PF13424.2|0.067,TPR_12|PF13424.2|0.77,TPR_12|PF13424.2|0.11,TPR_9|PF13371.2|0.00014,TPR_9|PF13371.2|8.6,PknG_TPR|PF16918.1|4.1,PknG_TPR|PF16918.1|0.00046,TPR_8|PF13181.2|7.9,TPR_8|PF13181.2|15,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|1.4e+03 S_Transcript_45360:378-1460(-)
DLFNGHHSPLIEVQVMAFLSPTTLSLHSYTQLNFLKFSKHNNNNVPINRKPHFTTSFPTIHPITACIPTKNTQTSNLLPTHQKISKHLVQNGVKLLVGSMILVGSLSVRPVLASPVQKGVTLEEKRDTQNEKVVEDEEMCVKLLETEPRNVEALKVVVNGKMRRGKTKEAVKYVERLIDIEPDQVEWRLLQALCYDVMGQLSKAKRLFKDVLKERPLLLRALHGLAMVMHKNHEGLAVFDMLNSALELAYREKRVTEERNIKILIAQMHLVKGDLDEALKQYQELVNENPRDFRPYLCQGIIYSLQDKKREAEEQFEIYRSLVPEEFPQRGFLEDVVLAAKTESREQLEKEFKAEFSYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST