Transcript Information: S_Transcript_453709.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value2.1E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33475473251799
Replicate 20.27751936550333
Replicate 30
Condition 2: 8 Hour
Replicate 10.26824390336016
Replicate 20.14070345056432
Replicate 31.2065574116027
Condition 3: 24 Hour
Replicate 10
Replicate 20.99777786814108
Replicate 30.15862921009507


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_453709.p1 GENE.S_Transcript_453709~~S_Transcript_453709.p1 ORF type:5prime_partial len:159 (+),score=15.96,Pectinesterase|PF01095.15|4.3e-33 S_Transcript_453709:2-478(+)
CACAAAGGTCTTCACTATTTCCACAATTGCTTTATCCAAGGTTCCGTTGATTTCATCTTTGGCTATGGCAGATCCCTTTATGAGAATTGCACATTGAACTCAATAGCAAAGAAGGTGGCATCAGTGACAGCACAAAAGCGGACAGCATCCTCACTGTCAAGTGGATTCTCATTTAAAGACTGTAAAGTGACAGGGAGTGGGTTGGTTTACTTGGGCAGAGCATGGGGTGATTATTCCAGGGTCGTTTTCTCTTTCACTTTCATGGACAAACTTGTTCTCCCTCTAGGCTGGAGCAACTGGGCCCACCCCAACAGAAATTTGAGTGTATACTATGGTGAGTACAAATGTAGTGGACCTGGATCTAGCATGACAAGGAGGGTGCCTTGGGCTCGGGCCCTCACGGACCAAGAGGTTGAACCTTTTATTGGACCACAATACATAGAGGGCGACACCTGGCTCATGAGCTCATCAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_453709.p1 GENE.S_Transcript_453709~~S_Transcript_453709.p1 ORF type:5prime_partial len:159 (+),score=15.96,Pectinesterase|PF01095.15|4.3e-33 S_Transcript_453709:2-478(+)
HKGLHYFHNCFIQGSVDFIFGYGRSLYENCTLNSIAKKVASVTAQKRTASSLSSGFSFKDCKVTGSGLVYLGRAWGDYSRVVFSFTFMDKLVLPLGWSNWAHPNRNLSVYYGEYKCSGPGSSMTRRVPWARALTDQEVEPFIGPQYIEGDTWLMSSST*

Click here to download the sequence:
Link to NCBI Protein BLAST