Transcript Information: S_Transcript_45451.p1


Annotated TAIR IDAT3G16230.2
Annotated Gene NamePredicted eukaryotic LigT
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5500563-5503303 | Forward length=449
E-Value6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5398649165896
Replicate 24.7153805132728
Replicate 34.484116224248
Condition 2: 8 Hour
Replicate 17.7356808013129
Replicate 27.5450156196725
Replicate 38.2337685846693
Condition 3: 24 Hour
Replicate 16.9389629911299
Replicate 26.5769492417635
Replicate 36.725878508031


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45451.p1 GENE.S_Transcript_45451~~S_Transcript_45451.p1 ORF type:complete len:510 (+),score=81.61,AKAP7_NLS|PF10469.5|3.5e-37,KH_1|PF00013.25|1.4e-05 S_Transcript_45451:126-1655(+)
ATGATTGCTTATAGTTCGAGGACTTTATCCAGGTACTCCATACACAAACCCCTCCACTTTGATTTCCTTGTTCTATCTCTCTCTACCTCAATCATTCATCACTTTAGTCTACCAAAAAAAAAAAAAATCATTCATCACTTAAAGACTCACAAAATTTGGTTTTTTTCCCCTTTTTCTCACTTGTCTAATACCAAACCCATTATTAATGGTTTCTTCTCTCCTGTTACGCAGAATTCCTCTAGTGTTTCAGTTTACAAGCTCTTATTACACCATCGTCAATCTTACAAGGGAAACCACTCTTATCATGGATTAAGATATATTAGCAAGAAAAGTGTGACAAAGGGTGTTCAGTGTCCAATGGGCTGGAACAAAAAGAAAAAAACTGGTACTCCTGTTTGGAGACCAATCAGTACCCAGTGCAGTTCTAACGAAGAGTGCTTAGAGGGGGATGTAATGGCTGATCCTCAAGATAATGCCAGCATTGAACTAGATGAACATGAGAATCAGATTGTATCCGTCGTGAGAGAAATAGCTCAGTCCACTATATCACCTTCATCTTTGCAAGTTGAAAATACAGTAGCTGAAGGAGTGTTGGCTATTCCAACTTCTACTTGTCAAAAGATTGGAATAAAGGATGCTGACGATATGTTGGGGGATTCCACAGCTGCTTCTGCCATGCAGAACAGCTCTGAAGTAGGAGATGATGAAAAAGCATCAAAACTGTCCAAGGAAAAACATTCTGTTTCTATGGAGATAGGCGCTTCTGTCATGCGTTTCATCAGAGGAAAAGTTGGATCTATGCAGAAAAGTCTGGAAGAGGACATGGGAGTAAAAATAATATTTCCATCATCAAAAATGGAAGACTCCATTGTATTCGAAGGCGAATCTGTTGATGTAATCAATAAAGCTTCGGAAAAGATCCAAGCTATCATTGACGAGGCGGTCAAGAGCCCGGCTTTTCAGTACTCTCACTTTGTCTCGCTTCCATTGGCTATATACCCTGAGCTGGTTGATAAGCTTGCGAGATTTCAGTGCACCATACTCGGTGATTGTGATGCTAAAGATGTAGAAGATACTGCAGATGATGTTTCTACAGAAGAGGATGAGGATAAAATTGATCAACCTTGGAAAACACCTGATGTTGCTGTCAAACTTCAAGTTGAAAATGACACCAATCATGTTGATGTCTCTATGAAAATGCCTCTTGTAAGCTATGCACCTAAAGCATCAAAGTCTCGTACTTTATCAGACTTAGGAATCGACAAATCTATATTCATTAAGCCGAAAACATTTCACTTGACCGTACTAATGCTGAAGCTGTGGAACAAGGAACATATTTATGCAGCCACTGAGGTTTTGCAGATTGTATCTTCTAAAGTAATTGAGGTCTTGGACAATCGACCTTTGTTTGTAAGACTTAAGGGGCTGGATTGCATGAGAGGATCCAGGGCAAAGGCTCATGTCCTTTATGCTCCTGTAGAAGAAGTAGGCAATGAGGATCGACTTTCACGTGCATGTCGTATCCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45451.p1 GENE.S_Transcript_45451~~S_Transcript_45451.p1 ORF type:complete len:510 (+),score=81.61,AKAP7_NLS|PF10469.5|3.5e-37,KH_1|PF00013.25|1.4e-05 S_Transcript_45451:126-1655(+)
MIAYSSRTLSRYSIHKPLHFDFLVLSLSTSIIHHFSLPKKKKIIHHLKTHKIWFFSPFSHLSNTKPIINGFFSPVTQNSSSVSVYKLLLHHRQSYKGNHSYHGLRYISKKSVTKGVQCPMGWNKKKKTGTPVWRPISTQCSSNEECLEGDVMADPQDNASIELDEHENQIVSVVREIAQSTISPSSLQVENTVAEGVLAIPTSTCQKIGIKDADDMLGDSTAASAMQNSSEVGDDEKASKLSKEKHSVSMEIGASVMRFIRGKVGSMQKSLEEDMGVKIIFPSSKMEDSIVFEGESVDVINKASEKIQAIIDEAVKSPAFQYSHFVSLPLAIYPELVDKLARFQCTILGDCDAKDVEDTADDVSTEEDEDKIDQPWKTPDVAVKLQVENDTNHVDVSMKMPLVSYAPKASKSRTLSDLGIDKSIFIKPKTFHLTVLMLKLWNKEHIYAATEVLQIVSSKVIEVLDNRPLFVRLKGLDCMRGSRAKAHVLYAPVEEVGNEDRLSRACRIL*

Click here to download the sequence:
Link to NCBI Protein BLAST