Transcript Information: S_Transcript_45460.p1


Annotated TAIR IDAT3G16230.2
Annotated Gene NamePredicted eukaryotic LigT
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5500563-5503303 | Forward length=449
E-Value5.3E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.313716201994
Replicate 225.266760835169
Replicate 323.290734723224
Condition 2: 8 Hour
Replicate 137.829047161826
Replicate 238.616113736587
Replicate 333.658663773307
Condition 3: 24 Hour
Replicate 131.321707946073
Replicate 228.079795960401
Replicate 331.805739819687


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45460.p1 GENE.S_Transcript_45460~~S_Transcript_45460.p1 ORF type:complete len:544 (+),score=100.17,AKAP7_NLS|PF10469.5|6.9e-69,KH_1|PF00013.25|1.5e-05 S_Transcript_45460:126-1757(+)
ATGATTGCTTATAGTTCGAGGACTTTATCCAGAATTCCTCTAGTGTTTCAGTTTACAAGCTCTTATTGTACCATCGTCAATCTTACAAGGTATTTGCAGGGAAACCACTCTTATCATGGATTAAGATATATTAGCAAGAAAAGTGTGACAAAGGGTGTTCAGTGTCCAATGGGCTGGAACAAAAAGAAAAAAACTGGTACTCCTGTTTGGAGACCAATCAGTACCCAGTGCAGTTCTAACGAAGAGTGCTTAGAGGGGGATGTAATGGCTGATCCTCAAGATAATGCCAGCATTGAACTAGATGAACATGAGAATCAGATTGTATCCGTCGTGAGAGAAATAGCTCAGTCCACTATATCACCTTCATCTTTGCAAGTTGAAAATACAGTAGCTGAAGAAGGAGTGTTGGCTATTCCAACTTCTACTTGTCAAAAGATTGGAATAAAGGATGCTGACGATATGTTGGGGGATTCCACAGCTGCTTCTGCCATGCAGAACAGCTCTGAAGTAGGAGATGATGAAAAAGCATCAAAACTGTCCAAGGAAAAACATTCTGTTTCTATGGAGATAGGCGCTTCTGTCATGCGTTTCATCAGAGGAAAAGTTGGATCTATGCAGAAAAGTCTGGAAGAGGACATGGGAGTAAAAATAATATTTCCATCATCAAAAATGGAAGACTCCATTGTATTCGAAGGCGAATCTGTTGATGTAATCAATAAAGCTTCGGAAAAGATCCAAGCTATCATTGACGAGGCGGTCAAGAGCCCGGCTTTTCAGTACTCTCACTTTGTCTCGCTTCCATTGGCTATATACCCTGAGCTGGTTGATAAGCTTGCGAGATTTCAGTGCACCATACTCGGTGATTGTGATACTAAAGATGTAGAAGAGACTGCAGATGATGTTTCTACTGAAGAGGATGAAGATAAAATTGATCAACCTGGGAAAACACCTGATGTTGCTGTCAAACTTCAAGTTGAAGATGACTTCAATCATGTTAATGTCTCTATGAAAATACCTCTTGTAAGCTATGCACCTAAAGCATCAAAGTCTCGTACTTTATCAGACTTAGGAATCGACAAATCTATATTCATTAAGCCGAAAACATTTCACTTGACCGTACTAATGCTGAAGCTGTGGAACAAGGAACATATTTATGCAGCCACTGAGGTTTTGCAGATTGTATCTTCTAAAGTAATTGAGGTCTTGGACAATCGACCTTTGTTTGTAAGACTTAAGGGGCTGGATTGCATGAGAGGATCCAGGGCAAAGGCTCATGTCCTTTATGCTCCTGTAGAAGAAGTAGGCAATGAGGATCGACTTTCACGTGCATGTCAAGTGATAATTGATGCATATGTCAAAGCTGGTCTTGTTCTTGAGAGAGATATAGGACAAAAATTAAAGTTGCATGCTACTGTGATGAATACAACACATAGGAGGACACACAACAGGACGGGCAGAAAGAGATCGGAACCATTTGATGCCAGAGGCATATTTGATAAGTTTGGGTCCGAACATTGGGGAGATTATCATATCCGTGAAGCTCATCTATCTCAAAGGTTTTTGTACGACGACAATGGCTATTACCACTGTTGTGCCTCCATCCCATTTCCCGAAAATGCTTCAAGTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45460.p1 GENE.S_Transcript_45460~~S_Transcript_45460.p1 ORF type:complete len:544 (+),score=100.17,AKAP7_NLS|PF10469.5|6.9e-69,KH_1|PF00013.25|1.5e-05 S_Transcript_45460:126-1757(+)
MIAYSSRTLSRIPLVFQFTSSYCTIVNLTRYLQGNHSYHGLRYISKKSVTKGVQCPMGWNKKKKTGTPVWRPISTQCSSNEECLEGDVMADPQDNASIELDEHENQIVSVVREIAQSTISPSSLQVENTVAEEGVLAIPTSTCQKIGIKDADDMLGDSTAASAMQNSSEVGDDEKASKLSKEKHSVSMEIGASVMRFIRGKVGSMQKSLEEDMGVKIIFPSSKMEDSIVFEGESVDVINKASEKIQAIIDEAVKSPAFQYSHFVSLPLAIYPELVDKLARFQCTILGDCDTKDVEETADDVSTEEDEDKIDQPGKTPDVAVKLQVEDDFNHVNVSMKIPLVSYAPKASKSRTLSDLGIDKSIFIKPKTFHLTVLMLKLWNKEHIYAATEVLQIVSSKVIEVLDNRPLFVRLKGLDCMRGSRAKAHVLYAPVEEVGNEDRLSRACQVIIDAYVKAGLVLERDIGQKLKLHATVMNTTHRRTHNRTGRKRSEPFDARGIFDKFGSEHWGDYHIREAHLSQRFLYDDNGYYHCCASIPFPENASSS*

Click here to download the sequence:
Link to NCBI Protein BLAST