Transcript Information: S_Transcript_454910.p2


Annotated TAIR IDAT1G08880.1
Annotated Gene NameHistone superfamily protein
Annotated Gene Symbol(s)HTA5, H2AXA, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:2847144-2847676 | Reverse length=142
E-Value5.4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19425548346847
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.46677038551054
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_454910.p2 GENE.S_Transcript_454910~~S_Transcript_454910.p2 ORF type:5prime_partial len:137 (+),score=28.76,Histone|PF00125.20|1.1e-13,Histone_H2A_C|PF16211.1|2.4e-11 S_Transcript_454910:3-413(+)
ACTACTAGTAAAATGGCCGGAAAAGGAAAGGGTGGAAGAGGCAAGTCCTCAGGTTCAAGACCAGTTTCAAGATCATCAAAGGCTGGTCTTCAATTCCCAGTTGGTAGAATCGCTAGATTCCTCAAGCAAGGCAGATACTCCGAGAGAGTTGGTGCTGGTGCCCCAGTCTACCTCGCTGCCGTTCTTGAGTACCTCGCTGCTGAGGTCCTCGAACTCGCTGGAAACGCTGCCAAGGACAACAAGAAGACCAGAATTGTCCCAAGACACATTCTCCTCGCCATCAGAAACGACGAAGAACTCAACAAACTTTTGTCCAACACCACCATTGCTGAAGGAGGTGTCCTCCCCAACATTAGCGGTCCAGTTCACCACGGAAAGCAATCATCAGGAGAATCCAGCCAAGCCGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_454910.p2 GENE.S_Transcript_454910~~S_Transcript_454910.p2 ORF type:5prime_partial len:137 (+),score=28.76,Histone|PF00125.20|1.1e-13,Histone_H2A_C|PF16211.1|2.4e-11 S_Transcript_454910:3-413(+)
TTSKMAGKGKGGRGKSSGSRPVSRSSKAGLQFPVGRIARFLKQGRYSERVGAGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLLSNTTIAEGGVLPNISGPVHHGKQSSGESSQAV*

Click here to download the sequence:
Link to NCBI Protein BLAST