Transcript Information: S_Transcript_454986.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20009775364797
Replicate 20.49765690731236
Replicate 30.4160015657955
Condition 2: 8 Hour
Replicate 10.16034128057995
Replicate 20.16820938826862
Replicate 30.64107812345809
Condition 3: 24 Hour
Replicate 10.24637086643527
Replicate 20.5964160941144
Replicate 30.47409857904354


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_454986.p1 GENE.S_Transcript_454986~~S_Transcript_454986.p1 ORF type:internal len:266 (-),score=22.41,RVT_1|PF00078.23|3.1e-16 S_Transcript_454986:1-795(-)
GGCTTTACAAGGGGTTGGGTAAATAAGATCATGAAGTGTGTGACGTCCTCTTCTCTCTCGGTGTTGGTTAATGGCCTCCCTACCGATGCCTTTAAACCTCAAAGGGGCATTCGACAAGGGGACCCATTATCCCCTTACCTCTTTATATTATGTGCAGAGGCTTTTTCAAGACTATTAGAGCTGGAAGTGCAAAGAAGGGAGATGCATAGAGTTAAAATTTGCAGAGCGGCACCGGAGATATCACACCTTTTATTCGCAGATGACAGTGTCATTTTTTGCAGAGCTCATATGTCGGACATGAATGCTATTAAAAGGGTGCTGGCTTTATATGAGGCTAAGTCCGGCCAAAAGATTAATTTTCAGAAATCTGAAATTCTTTTTAGTTTGAATGTAACAACAGCATGCAGGGACCAAATTCGATCCAGCCTCAATGTGAAGGAAGTGGAAGGTTTATCCAAGTATTTGGGGATGCCCACAAGGATAGGGAGATCAAGAAAGAATGTGTTTAACCCTATCAAGGAGCGAATATGGAAGAAACTCCAAGGATGGAAGCAAAAAGTCTTATCTTTTGCAGTTGCTCAAGCGATCCCTACCTATATGATGAGTTTGTTTCGTCTTCCAAAGGAGTTTTGTAAGAGTGTACAAAGCATAATCTCGAAGTTTTGGTGGGGGTGCCAAGGAGATGAAAAGAAGATCCATTGGGTGGCATGCTATGTTGCACGGGGACGGAAACGGAAACGGTTGCGGGTACGGAAACGGGGACGGGGAAACGGCAGAGTCCCAAAATCAAGAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_454986.p1 GENE.S_Transcript_454986~~S_Transcript_454986.p1 ORF type:internal len:266 (-),score=22.41,RVT_1|PF00078.23|3.1e-16 S_Transcript_454986:1-795(-)
GFTRGWVNKIMKCVTSSSLSVLVNGLPTDAFKPQRGIRQGDPLSPYLFILCAEAFSRLLELEVQRREMHRVKICRAAPEISHLLFADDSVIFCRAHMSDMNAIKRVLALYEAKSGQKINFQKSEILFSLNVTTACRDQIRSSLNVKEVEGLSKYLGMPTRIGRSRKNVFNPIKERIWKKLQGWKQKVLSFAVAQAIPTYMMSLFRLPKEFCKSVQSIISKFWWGCQGDEKKIHWVACYVARGRKRKRLRVRKRGRGNGRVPKSRN

Click here to download the sequence:
Link to NCBI Protein BLAST