Transcript Information: S_Transcript_45541.p1


Annotated TAIR IDAT4G08540.1
Annotated Gene NameDNA-directed RNA polymerase II protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:5433760-5436326 | Forward length=473
E-Value1E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9724292493321
Replicate 28.6539390074735
Replicate 39.340609869927
Condition 2: 8 Hour
Replicate 113.650088198682
Replicate 212.584164859846
Replicate 313.965555327402
Condition 3: 24 Hour
Replicate 111.299077667549
Replicate 210.208484093656
Replicate 37.2295946247423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45541.p1 GENE.S_Transcript_45541~~S_Transcript_45541.p1 ORF type:complete len:464 (+),score=84.55,Atg14|PF10186.5|5.3e-62,APG6|PF04111.8|1.1e-06 S_Transcript_45541:340-1731(+)
ATGATGAATCGGAAATCCTGTAGCTGTGCGATATGTGAATGCTCTATTGTTGCTTCAATTTGTACACCTTGCGTAAATGATAGATTGAATGATCACTTTACTAAGATAAACGCATTGAAGAATCGTCGGCATCCCTTGTACTTGAAGCTTACTGAAAAGCTGGCTGCCAAGAAAAAGGCTGATGAACAGCTTGCGTGGATAATTCTTCACAATGAGAAGATTGTTAGATTGAAAGAGAAGCTTCGTATAAGTCGAGAAGAACTCCTGCGTGACAAGTCTAAGAAGGAAAAAATGTCTCATGACCTCAAAGTCAGATATGGATTGCTTGATTCTTCTACAAATATGTTAGAGAAGAATCGGGTTGAACAACTGGAGAAGTCTTATCCTAATTGGATATGCACGCAGAGCCTAGGACATATGGCAATAACCTCAGAGCGCGTACATAAACAGTCAGTTATTATGAAACAGATCTGCAGAGTGTTCCCACAGCGCCGGGTAAAGGTGGATAATGAGAAGGACGGATTCAGTGGCCAATATGATGTAATTTGCCATGCTCGCTTACCTAGAGGCTTAAATCCTCATTCTGTTCCATCTGAGGAGCTTGCTGCATCACTGGGGTACATGGTGCAATTGCTGAATCTTGTTGTTCGAAACCTGGGACTTCCTGCACTTCATCACTCTGGTTTTGCTGGTTCTTGTTCTCGAATATGGCAGCGAAGTTCGTATTGGGATGCCCGTCCATCATCACGAAGCAATGAGTATCCTCTTTTCATTCCCCGGCAAAACTGCTGTACAAGTGGAGGAGAAAATTCATGGTCTGATAGGAGCTCAACCAATTTTGAAGTTGCATCAGTAGAATCTGAGAGGAAACTCCGACTTGATCCTTCTATCAGCTTTAACTATTCTTGTGCTTCACCACATTCAATAGAGACACATAATGACTTGCAGAAAGGGATTTCTCTTCTCAAGAAAAGTGTGGCATGTGTGACGGCATACTGTTATAACTCTCTCTGTCTGGATGTTCCCAGTGATGCTTCAACATTTGAAGCTTTTGCAAAGCTGTTGGCAACCCTTTCGTCATCAAAGGAAGTGCGATCTGTTTTCTCCTTGAAAATGGCCTGTTCAAGATCTTGTAAGCAAGTCCAGCAACTGAACAAATCTGTGTGGAATGTGAATTCTATGACAGCATCAAGTACAATGGCAGGAAGTGCGTACACACAATTTGTCCCGAGAAATATGCGTGATATATGTGATGTTGAAAAGAATGAAGGCCTTTTTGATGGATGGGACTTGGTGGAGCATCCAACTCTTCCTCCACCATCTGAAACTGAAGATGTTGAACATTGGACTCGGGCTATGTTTACTGATGCAACAAAAAGTAAACGATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45541.p1 GENE.S_Transcript_45541~~S_Transcript_45541.p1 ORF type:complete len:464 (+),score=84.55,Atg14|PF10186.5|5.3e-62,APG6|PF04111.8|1.1e-06 S_Transcript_45541:340-1731(+)
MMNRKSCSCAICECSIVASICTPCVNDRLNDHFTKINALKNRRHPLYLKLTEKLAAKKKADEQLAWIILHNEKIVRLKEKLRISREELLRDKSKKEKMSHDLKVRYGLLDSSTNMLEKNRVEQLEKSYPNWICTQSLGHMAITSERVHKQSVIMKQICRVFPQRRVKVDNEKDGFSGQYDVICHARLPRGLNPHSVPSEELAASLGYMVQLLNLVVRNLGLPALHHSGFAGSCSRIWQRSSYWDARPSSRSNEYPLFIPRQNCCTSGGENSWSDRSSTNFEVASVESERKLRLDPSISFNYSCASPHSIETHNDLQKGISLLKKSVACVTAYCYNSLCLDVPSDASTFEAFAKLLATLSSSKEVRSVFSLKMACSRSCKQVQQLNKSVWNVNSMTASSTMAGSAYTQFVPRNMRDICDVEKNEGLFDGWDLVEHPTLPPPSETEDVEHWTRAMFTDATKSKRC*

Click here to download the sequence:
Link to NCBI Protein BLAST