Transcript Information: S_Transcript_45546.p1


Annotated TAIR IDAT1G76450.1
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28684618-28686109 | Forward length=247
E-Value1.9E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.18819118452654
Condition 2: 8 Hour
Replicate 10.21760602364421
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.34689507514817
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45546.p1 GENE.S_Transcript_45546~~S_Transcript_45546.p1 ORF type:complete len:196 (+),score=25.82 S_Transcript_45546:31-588(+)
ATGACATGCCTGCGGCTGTGCCCTCCCCCTCCCATCTGCTGCTTCACCTTCACTTCTCATATTCGCAGTAACAAATCAGGCATTACGACAAACATGGGAAGCAGAAAGCAACGACAATCTGTTGTCTGCTCTTTGCCAAACAGTCAAGCTCTTACTACTACAAGAAGAGTGGCCACCCTGCACATAACCACCTTATCTGCACTTTACTTTTCCCATAATGCTGTTGCTCTGCCCCTGCCTCTCACTGATGCTCCTCCTGACTTTCGCCTTTACTCTGATGATGTCAATAAGTACCACATTTTCATTCCTCAAGATTGGCAAGTTGGAGCAGGGGAAACTAACGGATTCAAATCACTTACTGCATTTTACCCTGATGCAGCTTCTACTTCAAATGGTAACTATCATGCTCTTTGTTGGTCTTTTTTGGCGTCATTAATCAATGGTATTGGATCAATTTTCCTAATATTGCAGTCAGTGTGGCAATCACCGGTCTCGGTCCCGATTTCACCAGATTGGAATCATTTGGCAAGGTTGATGAATTTGCGGAAAATCTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45546.p1 GENE.S_Transcript_45546~~S_Transcript_45546.p1 ORF type:complete len:196 (+),score=25.82 S_Transcript_45546:31-588(+)
MTCLRLCPPPPICCFTFTSHIRSNKSGITTNMGSRKQRQSVVCSLPNSQALTTTRRVATLHITTLSALYFSHNAVALPLPLTDAPPDFRLYSDDVNKYHIFIPQDWQVGAGETNGFKSLTAFYPDAASTSNGNYHALCWSFLASLINGIGSIFLILQSVWQSPVSVPISPDWNHLARLMNLRKIW*

Click here to download the sequence:
Link to NCBI Protein BLAST